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PTPN1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:29.9TPM
GTEx:21.3RPKM
FANTOM5:86.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA012542

  

Antibody CAB015217

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 High   Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA012542

  

Antibody CAB009329

  

Antibody CAB015217

  

Adipocytes

 Medium   Low   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

29.9
N/A Female, age 80 Sample 1
TPM: 20.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 16
N/A Female, age 57 Sample 3
TPM: 13.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 28.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 70.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

21.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 20.9
Samples: 350

Max RPKM: 44.0
Min RPKM: 9.0
Std RPKM: 4.7
Median RPKM: 20.1
GTEX-14E6C-0226-SM-5S2N3 40-49 years, male 44.0
GTEX-X4XY-0326-SM-46MVZ 60-69 years, male 43.9
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 43.7
GTEX-REY6-0326-SM-2TF5A 60-69 years, male 42.9
GTEX-146FH-0226-SM-5QGPQ 50-59 years, female 36.4
GTEX-13OVJ-0326-SM-5L3GL 50-59 years, female 36.0
GTEX-13O1R-0226-SM-5K7U5 60-69 years, male 34.4
GTEX-S7SF-1826-SM-3K2AD 20-29 years, female 34.2
GTEX-Y3IK-2526-SM-4WWDM 50-59 years, female 32.6
GTEX-13NYS-0226-SM-5MR49 60-69 years, male 31.3
Show all
Adipose - Visceral (Omentum)
RPKM: 21.8
Samples: 227

Max RPKM: 89.9
Min RPKM: 11.2
Std RPKM: 10.4
Median RPKM: 18.5
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 89.9
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 80.5
GTEX-ZV7C-0826-SM-59HK8 50-59 years, male 73.4
GTEX-13RTK-0726-SM-5Q5EN 20-29 years, male 53.4
GTEX-11EM3-1126-SM-5A5KM 20-29 years, female 52.7
GTEX-ZTX8-0726-SM-59HL9 20-29 years, male 50.4
GTEX-13PL7-1226-SM-5SIAR 60-69 years, female 49.4
GTEX-ZTSS-1026-SM-5985N 40-49 years, male 47.7
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 41.7
GTEX-ZA64-0926-SM-5HL7H 20-29 years, male 41.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

86.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 86.2
FF:10010-101C1 65,65,76 years, mixed 86.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.