Tissue expression of PRPF40A - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	19.9	TPM
GTEx:	10.8	RPKM
FANTOM5:	59.2	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Low
Peripheral nerve:	Low

Antibody staining	Antibody HPA038272	Antibody HPA038273
Adipocytes	Low	Not detected
Fibroblasts	Medium	Not detected
Peripheral nerve	Medium	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA038272	Antibody HPA038273
Adipocytes	Low	Not detected
Fibroblasts	Not detected	Not detected
Peripheral nerve	Low	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	19.9

Female, age 80

Sample 1
TPM: 19.1

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 14.5

Female, age 57

Sample 3
TPM: 15.2

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 26.7

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 23.8

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	10.8

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 11.2

Samples: 350

Max RPKM: 20.4
Min RPKM: 7.6
Std RPKM: 1.7
Median RPKM: 10.9

GTEX-REY6-0326-SM-2TF5A

60-69 years, male

20.4

GTEX-OIZI-0226-SM-2XCEE

40-49 years, male

18.0

GTEX-QDT8-0226-SM-32PL4

30-39 years, female

17.5

GTEX-Y3IK-2526-SM-4WWDM

50-59 years, female

17.4

GTEX-P44H-0326-SM-2XCES

40-49 years, male

16.9

GTEX-S7SF-1826-SM-3K2AD

20-29 years, female

16.8

GTEX-TSE9-0226-SM-3DB84

60-69 years, female

15.5

GTEX-146FH-0226-SM-5QGPQ

50-59 years, female

15.2

GTEX-QEL4-0326-SM-3GAE5

50-59 years, male

15.1

GTEX-QCQG-1826-SM-2S1P2

50-59 years, female

15.0

Show all

Adipose - Visceral (Omentum)
RPKM: 10.1

Samples: 227

Max RPKM: 15.9
Min RPKM: 6.1
Std RPKM: 1.7
Median RPKM: 10.2

GTEX-11WQK-1526-SM-5EGKN

50-59 years, male

15.9

GTEX-13PVQ-2226-SM-5L3G9

50-59 years, male

15.8

GTEX-12WSG-0426-SM-5FQSE

50-59 years, female

15.7

GTEX-Y114-1326-SM-4TT9A

50-59 years, female

14.8

GTEX-13QBU-1326-SM-5LU4K

40-49 years, female

14.1

GTEX-11NV4-1426-SM-5BC4W

60-69 years, male

14.0

GTEX-WFJO-1026-SM-3GIKL

30-39 years, male

13.8

GTEX-13JUV-0626-SM-5J1MQ

40-49 years, female

13.7

GTEX-ZYVF-1026-SM-5E44V

50-59 years, female

13.5

GTEX-1128S-0926-SM-5GZZU

60-69 years, female

13.1

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	59.2

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 59.2

FF:10010-101C1

65,65,76 years, mixed

59.2