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ZSCAN16

GENERAL INFORMATION

Gene name

 ZSCAN16

Gene description

 Zinc finger and SCAN domain containing 16

Protein class

 Predicted intracellular proteins
Transcription factors

Predicted localization

 Intracellular

Number of transcripts

 1
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Mixed
GTEx:Expressed in all
FANTOM5:Mixed

Protein evidence

 Evidence at protein level

Protein expression

 General nuclear expression.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data.

Reliability score

 Supported based on 1 antibody.
HPA007290
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Mixed
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Mixed

GENE INFORMATION

Gene name

 ZSCAN16 (HGNC Symbol)

Synonyms

 dJ265C24.3, FLJ22191, ZNF392, ZNF435

Description

 Zinc finger and SCAN domain containing 16 (HGNC Symbol)

Entrez gene summary

Chromosome

 6

Cytoband

 p22.1

Chromosome location (bp)

 28124560 - 28130082

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000196812 (version 83.38)

Entrez gene

 80345

UniProt

 Q9H4T2 (UniProt - Evidence at protein level)

neXtProt

 NX_Q9H4T2

Antibodypedia

 ZSCAN16 antibodies

PROTEIN BROWSER
ZSCAN16-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
ZSCAN16-001
ENSP00000366527
ENST00000340487
Q9H4T2 [Direct mapping]
Zinc finger and SCAN domain-containing protein 16
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Predicted intracellular proteins
Transcription factors
   Zinc-coordinating DNA-binding domains
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0043565 [sequence-specific DNA binding]
GO:0046872 [metal ion binding]
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 348 aa
40.8 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.