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Gene name

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Chromosome

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In atlas

Reliability

Reliability

Reliability

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Method

Validation

Method

Validation

Method

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Cell line

Specificity

Cancer

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Detectable

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Detectable

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SLC39A10
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

SLC39A10

Gene description

Solute carrier family 39 (zinc transporter), member 10

Protein class

Predicted membrane proteins
Predicted secreted proteins
Transporters

Predicted localization

Membrane,Secreted

Number of transcripts

5
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enhanced (cerebral cortex, thyroid gland)
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic and membranous expression in several tissues, including thyroid gland.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Approved based on 2 antibodies.
HPA036512 , HPA036513
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
N/A
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Thyroid gland

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (cerebral cortex, thyroid gland)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

SLC39A10 (HGNC Symbol)

Synonyms

DKFZp564L2123, FLJ90515, KIAA1265

Description

Solute carrier family 39 (zinc transporter), member 10 (HGNC Symbol)

Entrez gene summary

Zinc is an essential cofactor for hundreds of enzymes. It is involved in protein, nucleic acid, carbohydrate, and lipid metabolism, as well as in the control of gene transcription, growth, development, and differentiation. SLC39A10 belongs to a subfamily of proteins that show structural characteristics of zinc transporters (Taylor and Nicholson, 2003 [PubMed 12659941]).[supplied by OMIM, Mar 2008]

Chromosome

2

Cytoband

q32.3

Chromosome location (bp)

195575977 - 195737702

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000196950 (version 83.38)

Entrez gene

57181

UniProt

Q9ULF5 (UniProt - Evidence at protein level)

neXtProt

NX_Q9ULF5

Antibodypedia

SLC39A10 antibodies

PROTEIN BROWSER

SLC39A10-001
SLC39A10-002
SLC39A10-007
SLC39A10-009
SLC39A10-012

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SLC39A10-001
ENSP00000352655
ENST00000359634
Q9ULF5 [Direct mapping]
Zinc transporter ZIP10
A0A024R3W5 [Target identity:100%; Query identity:100%]
Solute carrier family 39 (Zinc transporter), member 10, isoform CRA_a
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030001 [metal ion transport]
GO:0046873 [metal ion transmembrane transporter activity]
GO:0055085 [transmembrane transport]
Show all
831 aa
94.1 kDa
Yes 6
SLC39A10-002
ENSP00000386766
ENST00000409086
Q9ULF5 [Direct mapping]
Zinc transporter ZIP10
A0A024R3W5 [Target identity:100%; Query identity:100%]
Solute carrier family 39 (Zinc transporter), member 10, isoform CRA_a
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002903 [negative regulation of B cell apoptotic process]
GO:0005385 [zinc ion transmembrane transporter activity]
GO:0005886 [plasma membrane]
GO:0006882 [cellular zinc ion homeostasis]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030001 [metal ion transport]
GO:0030890 [positive regulation of B cell proliferation]
GO:0046873 [metal ion transmembrane transporter activity]
GO:0050861 [positive regulation of B cell receptor signaling pathway]
GO:0055085 [transmembrane transport]
GO:0071578 [zinc II ion transmembrane import]
GO:1903615 [positive regulation of protein tyrosine phosphatase activity]
Show all
831 aa
94.1 kDa
Yes 6
SLC39A10-007
ENSP00000389640
ENST00000458054
E7ENT5 [Direct mapping]
Zinc transporter ZIP10
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
126 aa
14.8 kDa
Yes 0
SLC39A10-009
ENSP00000409272
ENST00000418005
E7EV45 [Direct mapping]
Zinc transporter ZIP10
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
130 aa
15.3 kDa
Yes 0
SLC39A10-012
ENSP00000406590
ENST00000412905
C9J0F5 [Direct mapping]
Zinc transporter ZIP10
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
38 aa
4.6 kDa
Yes 0

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