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LAGE3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.0TPM
GTEx:6.9RPKM
FANTOM5:10.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA036122

  

Antibody HPA036123

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

11.0
overview Male, age 54 Sample 1
TPM: 13.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 14.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 7.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.1
Samples: 149

Max RPKM: 12.4
Min RPKM: 3.4
Std RPKM: 1.7
Median RPKM: 6.8
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 12.4
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 12.2
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 11.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 11.5
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 11.2
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 11.2
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 10.6
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 10.3
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 10.1
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 10.1
Show all
Colon - Transverse
RPKM: 6.8
Samples: 196

Max RPKM: 13.7
Min RPKM: 2.9
Std RPKM: 1.6
Median RPKM: 6.6
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 13.7
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 13.4
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 11.3
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 10.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 10.6
GTEX-QMRM-1226-SM-447C6 50-59 years, male 10.3
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 10.0
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 10.0
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 9.9
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 9.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

10.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 10.8
FF:10014-101C5 62,83,84 years, mixed 10.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.