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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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GMFB
  • TISSUE

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

GMFB

Gene description

Glia maturation factor, beta

Protein class

Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

5
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in several tissues, most abundant in CNS.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Caution, targets protein from more than one gene.

Reliability score

Approved based on 1 antibody.
HPA002954
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable) and liver cancer (unfavourable).
Renal cancer p<0.001
Liver cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA002954

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer tissues generally showed weak to moderate cytoplasmic immunoreactivity. Most cases of lymphomas, skin and lung cancers were negative.

GENE INFORMATION

Gene name

GMFB (HGNC Symbol)

Synonyms

GMF

Description

Glia maturation factor, beta (HGNC Symbol)

Entrez gene summary

Chromosome

14

Cytoband

q22.2

Chromosome location (bp)

54474484 - 54489196

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000197045 (version 83.38)

Entrez gene

2764

UniProt

P60983 (UniProt - Evidence at protein level)

neXtProt

NX_P60983

Antibodypedia

GMFB antibodies

PROTEIN BROWSER

GMFB-001
GMFB-002
GMFB-004
GMFB-201
GMFB-202

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GMFB-001
ENSP00000350757
ENST00000358056
P60983 [Direct mapping]
Glia maturation factor beta
Show all
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0004860 [protein kinase inhibitor activity]
GO:0004871 [signal transducer activity]
GO:0005622 [intracellular]
GO:0006468 [protein phosphorylation]
GO:0007165 [signal transduction]
GO:0007399 [nervous system development]
GO:0007612 [learning]
GO:0007626 [locomotory behavior]
GO:0008047 [enzyme activator activity]
GO:0008083 [growth factor activity]
GO:0034316 [negative regulation of Arp2/3 complex-mediated actin nucleation]
GO:0043085 [positive regulation of catalytic activity]
GO:0071933 [Arp2/3 complex binding]
GO:1904030 [negative regulation of cyclin-dependent protein kinase activity]
Show all
142 aa
16.7 kDa
No 0
GMFB-002
ENSP00000452410
ENST00000554908
G3V3X4 [Direct mapping]
Glia maturation factor beta
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0034316 [negative regulation of Arp2/3 complex-mediated actin nucleation]
GO:0071933 [Arp2/3 complex binding]
Show all
38 aa
4.5 kDa
No 0
GMFB-004
ENSP00000451920
ENST00000553333
G3V4P8 [Direct mapping]
Glia maturation factor beta
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005622 [intracellular]
GO:0034316 [negative regulation of Arp2/3 complex-mediated actin nucleation]
GO:0071933 [Arp2/3 complex binding]
Show all
150 aa
17.5 kDa
No 0
GMFB-201
ENSP00000479543
ENST00000616146
P60983 [Direct mapping]
Glia maturation factor beta
Show all
Predicted intracellular proteins
Plasma proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0004860 [protein kinase inhibitor activity]
GO:0004871 [signal transducer activity]
GO:0005622 [intracellular]
GO:0006468 [protein phosphorylation]
GO:0007165 [signal transduction]
GO:0007399 [nervous system development]
GO:0008047 [enzyme activator activity]
GO:0008083 [growth factor activity]
GO:0034316 [negative regulation of Arp2/3 complex-mediated actin nucleation]
GO:0043085 [positive regulation of catalytic activity]
GO:0071933 [Arp2/3 complex binding]
GO:1904030 [negative regulation of cyclin-dependent protein kinase activity]
Show all
142 aa
16.7 kDa
No 0
GMFB-202
ENSP00000487065
ENST00000628554
G3V3X4 [Direct mapping]
Glia maturation factor beta
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0034316 [negative regulation of Arp2/3 complex-mediated actin nucleation]
GO:0071933 [Arp2/3 complex binding]
Show all
38 aa
4.5 kDa
No 0

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