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C1D

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:23.9TPM
GTEx:4.1RPKM
FANTOM5:8.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA037413

  

Antibody HPA037588

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   High  
   
   
   

COLON - HPA RNA-seq

Average TPM

23.9
overview Male, age 54 Sample 1
TPM: 29.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 28
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 24.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 32.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 16.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 25.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 23.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 18.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 28.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 22.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 26.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.2
Samples: 149

Max RPKM: 6.7
Min RPKM: 2.1
Std RPKM: 0.6
Median RPKM: 4.2
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 6.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 5.8
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 5.8
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 5.5
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 5.5
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 5.5
GTEX-145LS-2926-SM-5O99G 60-69 years, female 5.4
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 5.3
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 5.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 5.3
Show all
Colon - Transverse
RPKM: 3.9
Samples: 196

Max RPKM: 5.8
Min RPKM: 1.8
Std RPKM: 0.7
Median RPKM: 4.0
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 5.8
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 5.8
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 5.8
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 5.7
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 5.6
GTEX-QMRM-1226-SM-447C6 50-59 years, male 5.5
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 5.4
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 5.3
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 5.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 5.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.9
FF:10014-101C5 62,83,84 years, mixed 8.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.