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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.1TPM
GTEx:8.9RPKM
FANTOM5:17.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Chondrocytes:Not detected
Fibroblasts:High
Peripheral nerve:Medium
 

Antibody staining

Antibody CAB005579

  

Adipocytes

 High  

Chondrocytes

 Not detected  

Fibroblasts

 High  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody CAB005579

  

Adipocytes

 High  

Fibroblasts

 High  

Peripheral nerve

 Not detected  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

13.1
N/A Female, age 80 Sample 1
TPM: 13.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 6.1
N/A Female, age 57 Sample 3
TPM: 5.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 25.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 15
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

8.9

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 8.4
Samples: 350

Max RPKM: 31.1
Min RPKM: 1.9
Std RPKM: 4.2
Median RPKM: 7.7
GTEX-14E6C-0226-SM-5S2N3 40-49 years, male 31.1
GTEX-ZYFD-0226-SM-5NQ86 50-59 years, male 28.6
GTEX-WI4N-1126-SM-3LK7Q 40-49 years, female 25.4
GTEX-1313W-0226-SM-5LZV7 50-59 years, female 23.4
GTEX-OXRO-0226-SM-3LK6F 60-69 years, female 22.1
GTEX-13NZ9-0526-SM-5J1OX 50-59 years, male 20.3
GTEX-Y111-0226-SM-4SOIW 50-59 years, male 20.1
GTEX-11UD2-0126-SM-5EQL2 50-59 years, male 19.6
GTEX-13PLJ-0126-SM-5L3HU 60-69 years, female 17.8
GTEX-139YR-2426-SM-5J1OB 50-59 years, male 17.7
Show all
Adipose - Visceral (Omentum)
RPKM: 9.7
Samples: 227

Max RPKM: 25.2
Min RPKM: 1.9
Std RPKM: 4.2
Median RPKM: 9.1
GTEX-ZTSS-1026-SM-5985N 40-49 years, male 25.2
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 25.2
GTEX-14ICL-0926-SM-5S2TU 30-39 years, male 25.1
GTEX-ZTX8-0726-SM-59HL9 20-29 years, male 23.2
GTEX-13OW7-1126-SM-5K7V6 50-59 years, male 23.1
GTEX-ZEX8-1226-SM-5S2OK 50-59 years, male 20.5
GTEX-WOFM-0726-SM-3MJF8 20-29 years, male 19.2
GTEX-11P82-0326-SM-5HL51 20-29 years, male 19.1
GTEX-ZV6S-1626-SM-5NQ81 40-49 years, female 19.0
GTEX-XBEW-1726-SM-4RGMA 40-49 years, male 18.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

17.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 17.9
FF:10010-101C1 65,65,76 years, mixed 17.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.