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MAP1LC3C

GENERAL INFORMATION

Gene name

 MAP1LC3C

Gene description

 Microtubule-associated protein 1 light chain 3 gamma

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 1
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Tissue enhanced (breast, placenta)
GTEx:Tissue enhanced (breast)
FANTOM5:Tissue enhanced (placenta)

Protein evidence

 Evidence at protein level

DATA RELIABILITY

Reliability score

 Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
N/A
Hippocampus
N/A
N/A
Caudate
N/A
N/A
Cerebellum
N/A
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Appendix
N/A
Tonsil
N/A
Spleen
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Oral mucosa
N/A
N/A
Esophagus
N/A
Stomach
N/A
Duodenum
N/A
Colon
N/A
Rectum
N/A
Kidney & urinary bladder
N/A
Kidney
N/A
Male tissues
N/A
Testis
N/A
Prostate
N/A
Female tissues
N/A
Breast
N/A
Vagina
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Soft tissue
N/A
N/A
Skin
N/A
Skin
N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (breast, placenta)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (breast)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (placenta)

GENE INFORMATION

Gene name

 MAP1LC3C (HGNC Symbol)

Synonyms

 ATG8J

Description

 Microtubule-associated protein 1 light chain 3 gamma (HGNC Symbol)

Entrez gene summary

 Autophagy is a highly regulated bulk degradation process that plays an important role in cellular maintenance and development. MAP1LC3C is an ortholog of the yeast autophagosome protein Atg8 (He et al., 2003 [PubMed 12740394]).[supplied by OMIM, Nov 2010]

Chromosome

 1

Cytoband

 q43

Chromosome location (bp)

 241995490 - 241999073

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000197769 (version 83.38)

Entrez gene

 440738

UniProt

 Q9BXW4 (UniProt - Evidence at protein level)

neXtProt

 NX_Q9BXW4

Antibodypedia

 MAP1LC3C antibodies

PROTEIN BROWSER
MAP1LC3C-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
MAP1LC3C-001
ENSP00000349785
ENST00000357246
Q9BXW4 [Direct mapping]
Microtubule-associated proteins 1A/1B light chain 3C
Show all
Predicted intracellular proteins
Show all
GO:0000045 [autophagosome assembly]
GO:0000407 [pre-autophagosomal structure]
GO:0000421 [autophagosome membrane]
GO:0000422 [mitophagy]
GO:0005515 [protein binding]
GO:0005776 [autophagosome]
GO:0005829 [cytosol]
GO:0005874 [microtubule]
GO:0006995 [cellular response to nitrogen starvation]
GO:0008017 [microtubule binding]
GO:0012505 [endomembrane system]
GO:0016236 [macroautophagy]
GO:0019898 [extrinsic component of membrane]
GO:0031090 [organelle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031625 [ubiquitin protein ligase binding]
GO:0044804 [nucleophagy]
GO:0061025 [membrane fusion]
Show all
 147 aa
16.9 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.