Tissue expression of FCHSD1 - Summary - The Human Protein Atlas

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FCHSD1

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	FCHSD1
Gene description	FCH and double SH3 domains 1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Mixed
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in all tissues, sometimes accompanied by membranous expression.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Approved based on 1 antibody. HPA043795
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Mixed
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	FCHSD1 (HGNC Symbol)
Synonyms	FLJ00007
Description	FCH and double SH3 domains 1 (HGNC Symbol)
Entrez gene summary
Chromosome	5
Cytoband	q31.3
Chromosome location (bp)	141639302 - 141651419
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000197948 (version 83.38)
Entrez gene	89848
UniProt	Q86WN1 (UniProt - Evidence at protein level)
neXtProt	NX_Q86WN1
Antibodypedia	FCHSD1 antibodies

PROTEIN BROWSER

FCHSD1-001	FCHSD1-002	FCHSD1-005	FCHSD1-011

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FCHSD1-001 ENSP00000399259 ENST00000435817	Q86WN1 [Direct mapping] F-BAR and double SH3 domains protein 1 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	690 aa 76.9 kDa	No	0
FCHSD1-002 ENSP00000428776 ENST00000519800	E5RGB1 [Direct mapping] F-BAR and double SH3 domains protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		255 aa 28.7 kDa	No	0
FCHSD1-005 ENSP00000428677 ENST00000522783	E5RGT6 [Direct mapping] F-BAR and double SH3 domains protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	598 aa 66.6 kDa	No	0
FCHSD1-011 ENSP00000430448 ENST00000518499	E5RK49 [Direct mapping] F-BAR and double SH3 domains protein 1 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] Show all	211 aa 24.1 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.