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S100A6

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1341.1TPM
GTEx:754.4RPKM
FANTOM5:589.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 
 

Antibody staining

Antibody HPA007575

  

Antibody CAB002601

  

Antibody CAB040549

  

Endothelial cells

 Medium   Medium   Medium  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium  
        
     
     
     

COLON - HPA RNA-seq

Average TPM

1341.1
overview Male, age 54 Sample 1
TPM: 1848.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1372.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1504.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1637.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1534.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1150.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 998.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1119.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1101.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1277
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1369.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1172.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1348.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

754.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 725.9
Samples: 149

Max RPKM: 1467.2
Min RPKM: 298.3
Std RPKM: 203.8
Median RPKM: 714.5
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 1467.2
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 1277.6
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 1210.3
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 1181.5
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 1174.9
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 1166.2
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 1151.3
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 1137.2
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 1068.1
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 1061.1
Show all
Colon - Transverse
RPKM: 776.1
Samples: 196

Max RPKM: 2929.9
Min RPKM: 254.1
Std RPKM: 298.7
Median RPKM: 721.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 2929.9
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 1990.1
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 1676.3
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 1622.6
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 1559.6
GTEX-117YX-0826-SM-5H11J 50-59 years, male 1461.2
GTEX-144GN-1126-SM-5LU33 50-59 years, male 1412.0
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 1387.9
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 1370.2
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 1267.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

589.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 589.0
FF:10014-101C5 62,83,84 years, mixed 589.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.