We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
S100A6
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:80.5RPKM
FANTOM5:31.2Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA007575

 

Antibody CAB002601

 

Antibody CAB040549

 

Glial cells

Not detected   Low   Low  

Neuronal cells

Low   Medium   Not detected  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

80.5

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 80.5
Samples: 94

Max RPKM: 397.4
Min RPKM: 27.3
Std RPKM: 47.5
Median RPKM: 70.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 397.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 214.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 196.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 187.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 166.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 159.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 131.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 129.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 127.1
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 125.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 120.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 113.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 110.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 110.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 103.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 102.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 101.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 100.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 96.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 94.1
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 92.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 92.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 89.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 89.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 88.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 88.2
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 86.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 86.0
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 84.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 83.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 81.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 80.9
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 79.4
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 76.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 76.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 75.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 75.1
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 74.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 74.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 74.0
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 73.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 73.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 72.4
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 71.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 71.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 71.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 71.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 70.7
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 70.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 70.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 69.8
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 69.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 66.0
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 66.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 65.7
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 65.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 64.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 63.5
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 62.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 62.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 62.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 60.1
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 59.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 57.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 56.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 56.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 55.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 54.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 54.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 54.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 53.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 52.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 52.0
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 51.3
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 51.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 50.4
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 49.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 49.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 49.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 49.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 47.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 45.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 45.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 45.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 43.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 42.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 42.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 41.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 41.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 35.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 34.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 34.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 27.3
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

31.2

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 39.5
FF:10153-102I9 76 years, female 47.9
FF:10169-103B7 60 years, female 31.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.