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MT-ND1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9310.2TPM
GTEx:10983.4RPKM
FANTOM5:3102.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody CAB033779

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

9310.2
overview Male, age 54 Sample 1
TPM: 7020.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4719.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 5138.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 9906.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4919.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11175
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9506
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 16695
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11930.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 7689.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 10532.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 9910.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11888.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10983.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7842.7
Samples: 149

Max RPKM: 32556.8
Min RPKM: 1009.5
Std RPKM: 3631.3
Median RPKM: 8078.1
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 32556.8
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 17948.6
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 15041.6
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 14336.7
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 14157.3
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 13726.4
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 12239.9
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 12174.9
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 11903.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 11759.8
Show all
Colon - Transverse
RPKM: 13371.0
Samples: 196

Max RPKM: 37352.4
Min RPKM: 853.0
Std RPKM: 6406.1
Median RPKM: 12562.0
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 37352.4
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 33547.5
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 32148.8
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 30937.2
GTEX-139T6-1326-SM-5IFFO 50-59 years, male 29222.4
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 27976.0
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 27638.9
GTEX-U3ZM-1126-SM-4DXUB 40-49 years, male 27091.8
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 26922.3
GTEX-R55C-1126-SM-48FCJ 40-49 years, male 26544.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

3102.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 3102.3
FF:10014-101C5 62,83,84 years, mixed 3102.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.