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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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HSD3B1
  • TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

HSD3B1

Gene description

Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1

Protein class

Enzymes
FDA approved drug targets
Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

Intracellular,Membrane

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enhanced (urothelial cancer)
HPA (cell line):Cell line enriched (CACO-2)
HPA (normal tissue):Tissue enriched (placenta)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in placenta.

ANTIBODY IHC RELIABILITY

Data reliability
description

Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded. Paired antibodies with high similarity supports the expression profile.

Reliability score

Supported based on 3 antibodies.
HPA043261 , HPA043264 , HPA044028
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in urothelial cancer (favourable).
Urothelial cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enhanced (urothelial cancer)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA043261
HPA043264
HPA044028

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

All cancer tissues were negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer tissues were essentially negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cytoplasmic positivity was observed in tumor stroma in several cases. Tumor cells were essentially negative.

GENE INFORMATION

Gene name

HSD3B1 (HGNC Symbol)

Synonyms

HSD3B, HSDB3, SDR11E1

Description

Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 (HGNC Symbol)

Entrez gene summary

Chromosome

1

Cytoband

p12

Chromosome location (bp)

119507198 - 119515054

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000203857 (version 83.38)

Entrez gene

3283

UniProt

P14060 (UniProt - Evidence at protein level)

neXtProt

NX_P14060

Antibodypedia

HSD3B1 antibodies

PROTEIN BROWSER

HSD3B1-001
HSD3B1-004
HSD3B1-005

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

HSD3B1-001
ENSP00000358421
ENST00000369413
P14060 [Direct mapping]
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 3-beta-hydroxy-Delta(5)-steroid dehydrogenase Steroid Delta-isomerase
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   Isomerase
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003854 [3-beta-hydroxy-delta5-steroid dehydrogenase activity]
GO:0004769 [steroid delta-isomerase activity]
GO:0005743 [mitochondrial inner membrane]
GO:0005758 [mitochondrial intermembrane space]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006694 [steroid biosynthetic process]
GO:0006702 [androgen biosynthetic process]
GO:0006703 [estrogen biosynthetic process]
GO:0006704 [glucocorticoid biosynthetic process]
GO:0006705 [mineralocorticoid biosynthetic process]
GO:0008202 [steroid metabolic process]
GO:0016021 [integral component of membrane]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0030868 [smooth endoplasmic reticulum membrane]
GO:0044281 [small molecule metabolic process]
GO:0055114 [oxidation-reduction process]
Show all
373 aa
42.3 kDa
No 1
HSD3B1-004
ENSP00000432268
ENST00000528909
P14060 [Direct mapping]
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 3-beta-hydroxy-Delta(5)-steroid dehydrogenase Steroid Delta-isomerase
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   Isomerase
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003854 [3-beta-hydroxy-delta5-steroid dehydrogenase activity]
GO:0004769 [steroid delta-isomerase activity]
GO:0005743 [mitochondrial inner membrane]
GO:0005758 [mitochondrial intermembrane space]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006694 [steroid biosynthetic process]
GO:0006702 [androgen biosynthetic process]
GO:0006703 [estrogen biosynthetic process]
GO:0006704 [glucocorticoid biosynthetic process]
GO:0006705 [mineralocorticoid biosynthetic process]
GO:0008202 [steroid metabolic process]
GO:0016021 [integral component of membrane]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0030868 [smooth endoplasmic reticulum membrane]
GO:0044281 [small molecule metabolic process]
GO:0055114 [oxidation-reduction process]
Show all
373 aa
42.3 kDa
No 1
HSD3B1-005
ENSP00000435999
ENST00000531340
E9PRN7 [Direct mapping]
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003854 [3-beta-hydroxy-delta5-steroid dehydrogenase activity]
GO:0006694 [steroid biosynthetic process]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0055114 [oxidation-reduction process]
Show all
82 aa
9.3 kDa
No 0

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