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PCMTD2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:29.7TPM
GTEx:11.6RPKM
FANTOM5:32.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Medium
 
 
 

Antibody staining

Antibody HPA057849

  

Fibroblasts

 Medium  
    
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA057849

  

Adipocytes

 Low  

Fibroblasts

 Not detected  

Peripheral nerve

 High  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

29.7
N/A Female, age 80 Sample 1
TPM: 33.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 41.9
N/A Female, age 57 Sample 3
TPM: 38
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 17.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 17.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 10.9
Samples: 350

Max RPKM: 25.3
Min RPKM: 3.0
Std RPKM: 3.4
Median RPKM: 10.7
GTEX-13N2G-2726-SM-5J1MG 60-69 years, male 25.3
GTEX-13NZ9-0526-SM-5J1OX 50-59 years, male 21.1
GTEX-12WSB-0226-SM-5GCOR 60-69 years, female 20.8
GTEX-NL3G-0226-SM-4RGLU 60-69 years, female 20.0
GTEX-13NZ8-0926-SM-5MR3U 60-69 years, female 19.8
GTEX-SSA3-0226-SM-32QPN 60-69 years, male 19.4
GTEX-11EQ8-0226-SM-5EQ5G 60-69 years, male 19.2
GTEX-UTHO-0426-SM-5SI7N 60-69 years, male 19.1
GTEX-QEL4-0326-SM-3GAE5 50-59 years, male 18.9
GTEX-X261-0226-SM-3NMD2 50-59 years, male 18.6
Show all
Adipose - Visceral (Omentum)
RPKM: 12.6
Samples: 227

Max RPKM: 37.0
Min RPKM: 2.3
Std RPKM: 6.5
Median RPKM: 11.8
GTEX-12ZZW-2326-SM-5DUW2 50-59 years, male 37.0
GTEX-13W46-1226-SM-5SIAS 50-59 years, male 30.4
GTEX-Y8E4-1226-SM-5IFIM 40-49 years, male 28.2
GTEX-ZF28-1426-SM-5S2OG 60-69 years, male 27.7
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 27.3
GTEX-13PL6-0926-SM-5KLYY 40-49 years, female 27.3
GTEX-WYVS-0626-SM-4SOJY 40-49 years, female 27.3
GTEX-14BIN-1226-SM-5S2OM 50-59 years, female 27.1
GTEX-XBEC-1826-SM-4QASN 50-59 years, male 26.9
GTEX-ZAB5-1126-SM-5Q5AD 50-59 years, male 26.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

32.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 32.8
FF:10010-101C1 65,65,76 years, mixed 32.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.