Tissue expression of EFCAB7 - Staining in colon

COLON - Expression summary

Protein expression

RNA expression

HPA:	2.8	TPM
GTEx:	1.2	RPKM
FANTOM5:	13.8	Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glandular cells:	Not detected
Peripheral nerve/ganglion:	Not detected

Antibody staining	Antibody HPA029611	Antibody HPA029612	Antibody HPA029613
Endothelial cells	Low	Low	High
Glandular cells	High	Not detected	Not detected
Peripheral nerve/ganglion	Low	Not detected	Low

COLON - HPA RNA-seq

Average TPM	2.8

Male, age 54

Sample 1
TPM: 2.8

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 2.3

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 1.1

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 2.1

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 1.8

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 4.2

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 2.7

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 2.3

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 3.2

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 3.2

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 4.1

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 4.2

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 2

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	1.2

GTEx sample id

Sample description

RPKM

Colon - Sigmoid
RPKM: 1.6

Samples: 149

Max RPKM: 3.1
Min RPKM: 0.5
Std RPKM: 0.4
Median RPKM: 1.5

GTEX-132AR-2826-SM-5IJFV

50-59 years, female

3.1

GTEX-XV7Q-2226-SM-4BRVY

40-49 years, female

2.7

GTEX-13VXT-2026-SM-5L3EW

20-29 years, female

2.6

GTEX-WYVS-1126-SM-4SOJX

40-49 years, female

2.6

GTEX-13SLW-2826-SM-5Q5ES

70-79 years, male

2.5

GTEX-ZYY3-2226-SM-5E45A

60-69 years, female

2.5

GTEX-12KS4-2326-SM-5EGJB

30-39 years, male

2.4

GTEX-145ME-1126-SM-5SIAT

40-49 years, female

2.4

GTEX-ZC5H-2426-SM-4WAZ6

40-49 years, female

2.4

GTEX-ZF28-2526-SM-57WFH

60-69 years, male

2.4

Show all

Colon - Transverse
RPKM: 1.0

Samples: 196

Max RPKM: 2.7
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.9

GTEX-U3ZH-1326-SM-4DXSF

30-39 years, male

2.7

GTEX-11P81-1126-SM-5GU5G

30-39 years, female

2.5

GTEX-ZYFC-2626-SM-5NQ6S

50-59 years, male

2.4

GTEX-145LS-2726-SM-5Q5D8

60-69 years, female

2.3

GTEX-WQUQ-2526-SM-4MVNO

60-69 years, male

2.1

GTEX-111YS-1626-SM-5GZZ9

60-69 years, male

2.0

GTEX-12KS4-2426-SM-5LU8P

30-39 years, male

2.0

GTEX-13FHP-2426-SM-5KLZ5

50-59 years, male

2.0

GTEX-ZV6S-1226-SM-59HLH

40-49 years, female

2.0

GTEX-13O3O-2526-SM-5L3DR

60-69 years, female

1.9

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	13.8

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 13.8

FF:10014-101C5

62,83,84 years, mixed

13.8