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PSMB8

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.8TPM
GTEx:48.5RPKM
FANTOM5:74.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA046995

  

Antibody HPA050327

  

Endothelial cells

 Medium   Low  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

13.8
overview Male, age 54 Sample 1
TPM: 9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 16.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 26.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 10.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 16.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

48.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 28.9
Samples: 149

Max RPKM: 48.8
Min RPKM: 12.9
Std RPKM: 7.9
Median RPKM: 27.6
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 48.8
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 48.2
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 47.8
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 47.4
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 47.2
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 47.1
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 47.0
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 45.1
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 44.4
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 43.0
Show all
Colon - Transverse
RPKM: 63.3
Samples: 196

Max RPKM: 159.2
Min RPKM: 17.5
Std RPKM: 29.3
Median RPKM: 59.8
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 159.2
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 149.5
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 141.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 135.2
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 132.6
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 130.8
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 128.2
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 124.9
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 118.8
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 116.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

74.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 74.2
FF:10014-101C5 62,83,84 years, mixed 74.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.