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Gene name

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Reliability

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Cell line

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TAP2
  • TISSUE

  • CELL

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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

TAP2

Gene description

Transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)

Protein class

Disease related genes
Potential drug targets
Predicted membrane proteins
Transporters

Predicted localization

Membrane

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Mixed
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression mainly in subsets of immune cells in several tissues.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data. Caution, targets protein from more than one gene.

Reliability score

Approved based on 1 antibody.
HPA001312
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
N/A
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
N/A
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
N/A
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Kidney

Urinary bladder

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Mixed
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

TAP2 (HGNC Symbol)

Synonyms

ABCB3, D6S217E, PSF2, RING11

Description

Transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) (HGNC Symbol)

Entrez gene summary

The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MDR/TAP subfamily. Members of the MDR/TAP subfamily are involved in multidrug resistance. This gene is located 7 kb telomeric to gene family member ABCB2. The protein encoded by this gene is involved in antigen presentation. This protein forms a heterodimer with ABCB2 in order to transport peptides from the cytoplasm to the endoplasmic reticulum. Mutations in this gene may be associated with ankylosing spondylitis, insulin-dependent diabetes mellitus, and celiac disease. Alternative splicing of this gene produces products which differ in peptide selectivity and level of restoration of surface expression of MHC class I molecules. [provided by RefSeq, Feb 2014]

Chromosome

6

Cytoband

p21.32

Chromosome location (bp)

32821833 - 32838780

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000204267 (version 83.38)

Entrez gene

6891

UniProt

Q03519 (UniProt - Evidence at protein level)

neXtProt

NX_Q03519

Antibodypedia

TAP2 antibodies

PROTEIN BROWSER

TAP2-001
TAP2-002
TAP2-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

TAP2-001
ENSP00000364032
ENST00000374897
Q03519 [Direct mapping]
Antigen peptide transporter 2
Q5JNW1 [Target identity:100%; Query identity:100%]
TAP2; Transporter 2, ATP-binding cassette, sub-family B (MDR/TAP); Transporter 2, ATP-binding cassette, sub-family B (MDR/TAP), isoform CRA_b; cDNA FLJ77215, highly similar to Homo sapiens transporter 2, ATP-binding cassette, sub-family B (MDR/TAP), mRNA
Show all
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Disease related genes
Potential drug targets
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002250 [adaptive immune response]
GO:0002474 [antigen processing and presentation of peptide antigen via MHC class I]
GO:0002479 [antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent]
GO:0002481 [antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent]
GO:0002485 [antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent]
GO:0002489 [antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent]
GO:0002591 [positive regulation of antigen processing and presentation of peptide antigen via MHC class I]
GO:0005215 [transporter activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006810 [transport]
GO:0008152 [metabolic process]
GO:0015197 [peptide transporter activity]
GO:0015433 [peptide antigen-transporting ATPase activity]
GO:0015833 [peptide transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATPase activity]
GO:0019060 [intracellular transport of viral protein in host cell]
GO:0019885 [antigen processing and presentation of endogenous peptide antigen via MHC class I]
GO:0023029 [MHC class Ib protein binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
GO:0042590 [antigen processing and presentation of exogenous peptide antigen via MHC class I]
GO:0042626 [ATPase activity, coupled to transmembrane movement of substances]
GO:0042825 [TAP complex]
GO:0043657 [host cell]
GO:0046967 [cytosol to ER transport]
GO:0046968 [peptide antigen transport]
GO:0046978 [TAP1 binding]
GO:0046980 [tapasin binding]
GO:0055085 [transmembrane transport]
Show all
686 aa
75.7 kDa
No 8
TAP2-002
ENSP00000364034
ENST00000374899
Q03519 [Direct mapping]
Antigen peptide transporter 2
Q9UP03 [Target identity:100%; Query identity:100%]
Transporter 2 isoform; Transporter 2, ATP-binding cassette, sub-family B (MDR/TAP), isoform CRA_a
Show all
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002250 [adaptive immune response]
GO:0002474 [antigen processing and presentation of peptide antigen via MHC class I]
GO:0002479 [antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent]
GO:0002481 [antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent]
GO:0002485 [antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent]
GO:0002489 [antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent]
GO:0002591 [positive regulation of antigen processing and presentation of peptide antigen via MHC class I]
GO:0005215 [transporter activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006810 [transport]
GO:0008152 [metabolic process]
GO:0015197 [peptide transporter activity]
GO:0015433 [peptide antigen-transporting ATPase activity]
GO:0015833 [peptide transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATPase activity]
GO:0019060 [intracellular transport of viral protein in host cell]
GO:0019885 [antigen processing and presentation of endogenous peptide antigen via MHC class I]
GO:0023029 [MHC class Ib protein binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
GO:0042590 [antigen processing and presentation of exogenous peptide antigen via MHC class I]
GO:0042626 [ATPase activity, coupled to transmembrane movement of substances]
GO:0042825 [TAP complex]
GO:0043657 [host cell]
GO:0046967 [cytosol to ER transport]
GO:0046968 [peptide antigen transport]
GO:0046978 [TAP1 binding]
GO:0046980 [tapasin binding]
GO:0055085 [transmembrane transport]
Show all
653 aa
72 kDa
No 8
TAP2-201
ENSP00000481712
ENST00000620123
A0A087WYD6 [Direct mapping]
Antigen peptide transporter 2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002481 [antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent]
GO:0002485 [antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent]
GO:0002591 [positive regulation of antigen processing and presentation of peptide antigen via MHC class I]
GO:0005524 [ATP binding]
GO:0006810 [transport]
GO:0008152 [metabolic process]
GO:0015197 [peptide transporter activity]
GO:0015440 [peptide-transporting ATPase activity]
GO:0015833 [peptide transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016887 [ATPase activity]
GO:0042287 [MHC protein binding]
GO:0042626 [ATPase activity, coupled to transmembrane movement of substances]
GO:0042825 [TAP complex]
GO:0055085 [transmembrane transport]
Show all
702 aa
77.6 kDa
No 8

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