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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:31.3TPM
GTEx:21.9RPKM
FANTOM5:16.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Chondrocytes:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA001143

  

Antibody HPA024061

  

Antibody CAB016777

  

Adipocytes

 Not detected   Not detected   Low  

Fibroblasts

 Not detected   Not detected   Low  

Chondrocytes

 Not detected   Not detected  

Peripheral nerve

 Low  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA001143

  

Antibody HPA024061

  

Antibody CAB016777

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

31.3
N/A Female, age 80 Sample 1
TPM: 16.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 18
N/A Female, age 57 Sample 3
TPM: 17.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 44.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 59.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

21.9

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 13.5
Samples: 350

Max RPKM: 42.5
Min RPKM: 2.6
Std RPKM: 5.2
Median RPKM: 12.7
GTEX-12WSB-0226-SM-5GCOR 60-69 years, female 42.5
GTEX-11WQC-2426-SM-5EQKQ 60-69 years, male 33.9
GTEX-11O72-0226-SM-59869 40-49 years, male 31.1
GTEX-ZE9C-2826-SM-5S2MO 60-69 years, male 29.4
GTEX-S33H-1126-SM-2XCB6 30-39 years, male 27.7
GTEX-11DZ1-0226-SM-5A5KF 50-59 years, male 26.4
GTEX-13PDP-0226-SM-5K7W9 60-69 years, male 25.8
GTEX-11ZU8-2426-SM-5EQMV 60-69 years, male 25.3
GTEX-13NZ8-0926-SM-5MR3U 60-69 years, female 25.3
GTEX-13NZB-2426-SM-5K7UF 30-39 years, male 25.2
Show all
Adipose - Visceral (Omentum)
RPKM: 34.8
Samples: 227

Max RPKM: 131.7
Min RPKM: 5.7
Std RPKM: 21.5
Median RPKM: 28.9
GTEX-ZYW4-2226-SM-5GZYG 60-69 years, male 131.7
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 130.0
GTEX-XLM4-1026-SM-4AT51 60-69 years, male 102.1
GTEX-ZT9X-0926-SM-5O9C4 40-49 years, male 99.9
GTEX-11DXY-0326-SM-5H12F 60-69 years, male 88.7
GTEX-13X6I-1526-SM-5SIAC 60-69 years, male 88.7
GTEX-13NZ9-2026-SM-5KM1U 50-59 years, male 88.2
GTEX-12WSC-1726-SM-5GCN3 50-59 years, male 84.4
GTEX-X8HC-2326-SM-4QAS4 50-59 years, female 75.9
GTEX-13U4I-1726-SM-5J1MF 40-49 years, female 74.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

16.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 16.2
FF:10010-101C1 65,65,76 years, mixed 16.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.