We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
TMSB4X
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:10933.2TPM
GTEx:1597.3RPKM
FANTOM5:74.5Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Not detected
 

Antibody staining

Antibody CAB033806

 

Cells in red pulp

Low  

Cells in white pulp

Not detected  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

10933.2

overview Female, age 60 Sample 1
TPM: 9503.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17 Sample 2
TPM: 11120.4
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20 Sample 3
TPM: 11352.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19 Sample 4
TPM: 10438.7
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65 Sample 5
TPM: 12250.9
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

1597.3

GTEx sample id

Sample description

RPKM

Spleen
RPKM: 1597.3
Samples: 104

Max RPKM: 2362.6
Min RPKM: 1051.3
Std RPKM: 260.6
Median RPKM: 1560.2
GTEX-VJYA-0126-SM-4KL1P 60-69 years, male 2362.6
GTEX-12WSN-0126-SM-5DUX5 40-49 years, male 2219.6
GTEX-11P81-1326-SM-5GU5S 30-39 years, female 2186.0
GTEX-13S86-0126-SM-5S2PI 40-49 years, male 2175.1
GTEX-QMRM-0226-SM-4R1K7 50-59 years, male 2102.1
GTEX-POMQ-0126-SM-48TD6 20-29 years, female 2099.4
GTEX-13X6H-0726-SM-5Q5BX 50-59 years, female 2084.3
GTEX-139YR-0426-SM-5IFFV 50-59 years, male 2035.4
GTEX-ZDTT-1026-SM-5KM19 60-69 years, male 2012.7
GTEX-146FQ-0626-SM-5LU9U 30-39 years, male 1932.9
GTEX-11NSD-0426-SM-5N9CR 20-29 years, male 1891.3
GTEX-U4B1-0526-SM-4DXTK 40-49 years, male 1882.3
GTEX-ZAB5-0526-SM-5CVMU 50-59 years, male 1880.7
GTEX-ZYWO-0226-SM-5GZX3 40-49 years, female 1868.6
GTEX-ZYFG-0726-SM-5GIDX 60-69 years, female 1856.7
GTEX-ZPU1-1026-SM-4YCEQ 40-49 years, male 1856.4
GTEX-13N11-0126-SM-5KM2Z 50-59 years, female 1853.3
GTEX-U3ZH-0126-SM-4DXUK 30-39 years, male 1849.1
GTEX-11XUK-0426-SM-5EQML 40-49 years, female 1828.6
GTEX-U3ZN-0126-SM-4DXUM 30-39 years, female 1826.6
GTEX-144GN-2126-SM-5O99D 50-59 years, male 1825.1
GTEX-ZZPU-0126-SM-5E446 50-59 years, female 1802.1
GTEX-UJHI-0126-SM-4IHLP 50-59 years, female 1801.9
GTEX-132QS-0226-SM-5IFFZ 60-69 years, male 1781.7
GTEX-ZV6S-0826-SM-5NQ6Z 40-49 years, female 1770.9
GTEX-13U4I-1626-SM-5IFFR 40-49 years, female 1766.2
GTEX-13PVR-0326-SM-5RQJY 60-69 years, female 1762.0
GTEX-X3Y1-0126-SM-4PQZA 40-49 years, male 1755.9
GTEX-W5WG-0626-SM-4SOID 50-59 years, female 1755.2
GTEX-13111-0126-SM-5EGHO 50-59 years, male 1747.1
GTEX-RUSQ-0126-SM-47JWV 50-59 years, male 1735.4
GTEX-PLZ6-0126-SM-48TC6 30-39 years, male 1729.5
GTEX-XV7Q-0126-SM-4BRVK 40-49 years, female 1720.0
GTEX-Y3I4-0126-SM-4TT26 50-59 years, male 1718.0
GTEX-WHWD-0126-SM-4OORS 50-59 years, male 1709.0
GTEX-14E6E-1226-SM-5S2R5 30-39 years, male 1702.7
GTEX-XMK1-0126-SM-4B65F 40-49 years, male 1702.6
GTEX-OIZH-0926-SM-48TBR 50-59 years, male 1668.4
GTEX-1399S-0226-SM-5IFFG 30-39 years, female 1657.3
GTEX-146FR-1926-SM-5NQA6 60-69 years, female 1657.1
GTEX-14DAR-0326-SM-5S2PS 50-59 years, male 1653.9
GTEX-13FH7-1326-SM-5IFG8 50-59 years, female 1640.8
GTEX-Z9EW-0726-SM-5HL9H 40-49 years, male 1632.7
GTEX-S3XE-0626-SM-4AD6B 50-59 years, male 1630.6
GTEX-147F3-0126-SM-5NQBJ 50-59 years, female 1627.2
GTEX-Q734-0226-SM-48U1A 40-49 years, female 1611.7
GTEX-ZVZP-0726-SM-59HKA 50-59 years, male 1607.8
GTEX-11DXX-0726-SM-5H12X 60-69 years, female 1605.8
GTEX-YEC4-0126-SM-4W21T 40-49 years, male 1605.1
GTEX-S4Z8-0226-SM-4AD5K 60-69 years, male 1579.3
GTEX-13PL7-1126-SM-5MR5O 60-69 years, female 1574.9
GTEX-QLQW-0126-SM-447BK 30-39 years, male 1561.2
GTEX-T5JW-0126-SM-4DM6K 20-29 years, female 1559.1
GTEX-O5YT-0926-SM-48TDG 20-29 years, male 1549.3
GTEX-XPVG-0626-SM-4B65B 50-59 years, male 1537.7
GTEX-139T6-0226-SM-5IFGZ 50-59 years, male 1534.5
GTEX-XAJ8-0126-SM-47JYG 40-49 years, male 1533.4
GTEX-OOBJ-0926-SM-48TDO 60-69 years, male 1531.6
GTEX-11EQ9-0426-SM-5A5JY 30-39 years, male 1528.8
GTEX-QV44-0126-SM-4R1KH 50-59 years, male 1527.9
GTEX-QV31-0126-SM-447BP 30-39 years, male 1524.0
GTEX-QCQG-0226-SM-48U28 50-59 years, female 1523.4
GTEX-131XE-1126-SM-5EGHW 50-59 years, male 1520.8
GTEX-11VI4-0126-SM-5GU6Z 40-49 years, female 1519.4
GTEX-12BJ1-0726-SM-5EGGF 60-69 years, male 1513.1
GTEX-Y5LM-0326-SM-4VBRN 40-49 years, female 1476.8
GTEX-11LCK-0126-SM-5A5M5 30-39 years, male 1474.6
GTEX-PW2O-0126-SM-48TC8 20-29 years, male 1473.2
GTEX-145MN-0126-SM-5RQHY 30-39 years, male 1472.8
GTEX-XGQ4-0126-SM-4AT4H 50-59 years, male 1461.9
GTEX-UPK5-1626-SM-4JBHI 40-49 years, male 1457.2
GTEX-P4QS-0926-SM-48TBS 60-69 years, male 1456.6
GTEX-12WSG-0926-SM-5EGIH 50-59 years, female 1453.4
GTEX-XXEK-0126-SM-4BRVU 50-59 years, male 1450.5
GTEX-ZP4G-0326-SM-4YCEF 20-29 years, female 1448.1
GTEX-13CF3-0226-SM-5J1NW 60-69 years, female 1438.1
GTEX-ZLFU-0526-SM-4WWBN 40-49 years, male 1419.2
GTEX-1211K-0426-SM-5FQTP 60-69 years, female 1409.6
GTEX-X585-1826-SM-4QAS3 50-59 years, male 1406.7
GTEX-YB5E-0426-SM-5IFHR 40-49 years, male 1393.1
GTEX-131XG-0426-SM-5IFGD 50-59 years, female 1386.1
GTEX-YB5K-1926-SM-4VDT4 40-49 years, female 1381.2
GTEX-1399R-0226-SM-5IJGG 30-39 years, male 1365.6
GTEX-Y3IK-0126-SM-4WWE9 50-59 years, female 1364.9
GTEX-X4LF-0226-SM-4QAS8 50-59 years, male 1361.9
GTEX-13VXT-1326-SM-5LU3Y 20-29 years, female 1360.6
GTEX-ZLWG-0426-SM-4WWFA 50-59 years, female 1355.3
GTEX-11P7K-0426-SM-5BC5H 30-39 years, male 1311.8
GTEX-ZVP2-0526-SM-51MSC 50-59 years, male 1309.2
GTEX-117YX-2126-SM-5GIEL 50-59 years, male 1306.6
GTEX-Q2AH-0226-SM-48U1I 40-49 years, male 1302.2
GTEX-Y8LW-0126-SM-4VBS1 50-59 years, female 1288.7
GTEX-YFCO-0926-SM-5LUA5 40-49 years, male 1288.2
GTEX-WFON-0126-SM-4LVM9 40-49 years, male 1260.2
GTEX-PX3G-0926-SM-48U12 20-29 years, female 1252.5
GTEX-QDVN-0526-SM-48TZ4 50-59 years, male 1252.2
GTEX-P4PP-0926-SM-48TBZ 30-39 years, female 1232.3
GTEX-R55G-0226-SM-48FEI 40-49 years, female 1228.1
GTEX-Y114-0726-SM-4TT6U 50-59 years, female 1215.0
GTEX-XQ8I-1726-SM-4BOQB 50-59 years, male 1201.5
GTEX-12WSJ-0526-SM-5GCOZ 40-49 years, female 1196.4
GTEX-1122O-0526-SM-5N9DM 60-69 years, female 1183.7
GTEX-XUJ4-0226-SM-4BOP8 60-69 years, female 1167.6
GTEX-12WSK-0126-SM-5GCO7 40-49 years, female 1051.3
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

74.5

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 74.5
FF:10025-101D7 39,50,70 years, male 74.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.