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ESOPHAGUS - Expression summary

RNA expression
HPA:4.6TPM
GTEx:1.9RPKM
FANTOM5:7.6Tags Per Million

ESOPHAGUS - Annotated protein expression
 

Antibody staining

Antibody HPA000900

  

Squamous epithelial cells

 Not detected  
 

ESOPHAGUS - HPA RNA-seq

Average TPM

4.6
overview Female, age 70 Sample 1
TPM: 4
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 4.3
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 5.3
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

1.9

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 1.9
Samples: 286

Max RPKM: 3.8
Min RPKM: 0.6
Std RPKM: 0.5
Median RPKM: 1.8
GTEX-13X6I-1026-SM-5LU4C 60-69 years, male 3.8
GTEX-144GO-2726-SM-5O9A2 60-69 years, male 3.7
GTEX-RNOR-1226-SM-48FDQ 50-59 years, female 3.4
GTEX-11DYG-1326-SM-5N9DO 60-69 years, male 3.3
GTEX-13PVQ-1726-SM-5IFF3 50-59 years, male 3.3
GTEX-RU72-0726-SM-46MUW 50-59 years, female 3.1
GTEX-13OVJ-1226-SM-5L3HA 50-59 years, female 3.0
GTEX-13X6K-2126-SM-5O9D4 60-69 years, female 3.0
GTEX-ZZPT-1426-SM-5N9C5 50-59 years, male 3.0
GTEX-WEY5-0926-SM-4LMI4 40-49 years, female 2.9
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

7.6

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 7.6
FF:10015-101C6 68,74,75 years, mixed 7.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.