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Field

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Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

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Detectable

Cancer

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Score

Score

Score

Antibodies

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GPX3
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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:217.9TPM
GTEx:1735.6RPKM
FANTOM5:4516.0Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody CAB069456

 

Adipocytes

Low  

Glandular cells

Not detected  

Myoepithelial cells

Not detected  
 
 
 

BREAST - HPA RNA-seq

Average TPM

217.9

overview Female, age 52 Sample 1
TPM: 190.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 524.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 42.8
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 114.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

1735.6

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 1735.6
Samples: 214

Max RPKM: 8254.1
Min RPKM: 38.7
Std RPKM: 1574.4
Median RPKM: 1284.3
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 8254.1
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 7052.7
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 6989.5
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 6607.2
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 6189.4
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 5904.1
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 5478.1
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 5461.9
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 5419.9
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 5361.7
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 5299.3
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 5232.8
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 4924.8
GTEX-REY6-2426-SM-48FF5 60-69 years, male 4807.3
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 4409.7
GTEX-11P82-1326-SM-5HL62 20-29 years, male 4406.7
GTEX-R55D-0826-SM-48FEA 50-59 years, male 4373.0
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 4321.9
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 4274.3
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 4143.6
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 4091.8
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 4085.4
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 3920.9
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 3859.9
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 3560.3
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 3546.2
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 3457.7
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 3376.7
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 3353.9
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 3321.2
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 3320.4
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 3276.2
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 3079.6
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 3060.3
GTEX-144GM-0926-SM-5O994 20-29 years, male 3037.7
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 3030.4
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 3029.5
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 2981.2
GTEX-X261-0626-SM-3NMD9 50-59 years, male 2843.5
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 2838.3
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 2832.2
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 2782.1
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 2753.4
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 2747.2
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 2742.3
GTEX-14753-2426-SM-5LU8U 60-69 years, male 2688.9
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 2663.8
GTEX-117YX-1426-SM-5H12H 50-59 years, male 2630.3
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 2620.3
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 2608.2
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 2561.7
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 2556.0
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 2545.6
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 2461.9
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 2410.2
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 2386.5
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 2386.0
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 2363.7
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 2362.2
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 2313.3
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 2283.3
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 2244.8
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 2207.0
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 2176.4
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 2170.0
GTEX-13113-1726-SM-5GCOO 60-69 years, female 2167.6
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 2144.7
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 2136.6
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 2135.5
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 2126.0
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 2111.2
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 2100.8
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 2088.1
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 2005.5
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 1895.8
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 1893.6
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 1880.0
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 1877.3
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 1861.2
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 1856.4
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 1797.5
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 1792.4
GTEX-1122O-1226-SM-5H113 60-69 years, female 1782.8
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 1753.7
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 1713.1
GTEX-R53T-1526-SM-48FEK 50-59 years, female 1688.0
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 1665.4
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 1664.0
GTEX-1192X-2326-SM-5987X 50-59 years, male 1597.5
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 1595.7
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 1580.0
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 1558.9
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 1507.9
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 1490.5
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 1488.8
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 1488.7
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 1484.5
GTEX-WFON-1826-SM-3GILG 40-49 years, male 1458.5
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 1450.7
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 1437.2
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 1391.3
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 1360.9
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 1326.0
GTEX-QEL4-2126-SM-447AE 50-59 years, male 1322.5
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 1320.0
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 1304.5
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 1287.6
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 1281.0
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 1275.3
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 1253.9
GTEX-TML8-1226-SM-32QON 40-49 years, female 1200.7
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 1195.5
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 1190.7
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 1184.8
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 1158.4
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 1133.5
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 1125.9
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 1100.2
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 1088.1
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 1080.7
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 1073.7
GTEX-QVJO-1826-SM-447C9 60-69 years, female 1056.2
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 1027.2
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 1018.8
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 1011.0
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 971.5
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 970.6
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 964.9
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 953.3
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 948.9
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 911.4
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 903.6
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 865.8
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 862.5
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 857.8
GTEX-111YS-1926-SM-5GICC 60-69 years, male 840.1
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 837.8
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 831.4
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 757.9
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 718.3
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 711.1
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 705.1
GTEX-117XS-1926-SM-5GICO 60-69 years, male 703.1
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 701.7
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 697.8
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 696.4
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 696.3
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 686.9
GTEX-11P81-1926-SM-5BC53 30-39 years, female 682.3
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 666.4
GTEX-S341-1526-SM-4AD6K 40-49 years, female 637.2
GTEX-XBED-1626-SM-47JYN 60-69 years, male 630.2
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 627.2
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 607.5
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 592.3
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 585.9
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 581.5
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 549.2
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 516.1
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 512.5
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 506.6
GTEX-11EI6-0626-SM-5985T 60-69 years, male 490.5
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 482.2
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 474.7
GTEX-11OF3-1926-SM-59889 60-69 years, male 463.7
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 462.9
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 452.0
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 449.4
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 435.5
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 434.2
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 432.7
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 417.3
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 385.6
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 382.0
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 373.0
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 359.5
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 353.3
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 351.5
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 337.2
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 326.5
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 317.5
GTEX-RU72-0626-SM-46MUI 50-59 years, female 317.2
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 316.0
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 314.4
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 290.0
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 278.2
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 275.2
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 269.4
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 268.1
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 264.0
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 263.6
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 263.5
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 252.6
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 219.3
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 209.4
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 190.0
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 186.0
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 181.4
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 180.7
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 180.0
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 168.6
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 144.9
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 136.3
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 125.7
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 120.5
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 120.3
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 118.3
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 117.0
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 104.5
GTEX-T6MN-0726-SM-32PML 50-59 years, male 104.2
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 102.7
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 58.3
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 44.2
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 38.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

4516.0

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 4516.0
FF:10080-102A8 77 years, female 4516.0

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