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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.7TPM
GTEx:6.1RPKM
FANTOM5:5.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA011157

  

Antibody CAB002223

  

Antibody CAB012978

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA011157

  

Antibody CAB002223

  

Antibody CAB012978

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

4.7
N/A Female, age 80 Sample 1
TPM: 7.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 2
N/A Female, age 57 Sample 3
TPM: 4.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 6.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 3.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

6.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 6.3
Samples: 350

Max RPKM: 21.4
Min RPKM: 1.9
Std RPKM: 2.8
Median RPKM: 5.6
GTEX-13111-1726-SM-5EGJZ 50-59 years, male 21.4
GTEX-X638-0226-SM-47JZ9 70-79 years, female 21.3
GTEX-YECK-0226-SM-4W215 60-69 years, male 16.8
GTEX-UTHO-0426-SM-5SI7N 60-69 years, male 15.9
GTEX-ZC5H-0126-SM-4WAYL 40-49 years, female 14.4
GTEX-111VG-2326-SM-5N9BK 60-69 years, male 14.3
GTEX-OOBJ-0226-SM-2YUMM 60-69 years, male 14.2
GTEX-N7MS-0326-SM-4E3K2 60-69 years, male 13.4
GTEX-ZE9C-2826-SM-5S2MO 60-69 years, male 13.0
GTEX-XMD2-0226-SM-4WWEE 60-69 years, female 12.7
Show all
Adipose - Visceral (Omentum)
RPKM: 5.9
Samples: 227

Max RPKM: 39.7
Min RPKM: 1.5
Std RPKM: 4.0
Median RPKM: 5.0
GTEX-14A6H-1026-SM-5SIAZ 30-39 years, male 39.7
GTEX-ZC5H-1626-SM-5HL7L 40-49 years, female 30.6
GTEX-YJ89-1926-SM-5IFJ6 60-69 years, male 18.9
GTEX-13OW7-1126-SM-5K7V6 50-59 years, male 17.8
GTEX-13S7M-0826-SM-5QGQX 60-69 years, female 14.7
GTEX-WL46-2026-SM-3LK7U 50-59 years, male 13.7
GTEX-11DXY-0326-SM-5H12F 60-69 years, male 13.0
GTEX-X585-2526-SM-4QAS1 50-59 years, male 12.0
GTEX-ZDXO-2326-SM-5LU9W 60-69 years, male 11.9
GTEX-132Q8-1726-SM-5EGK8 60-69 years, male 10.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

5.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 5.1
FF:10010-101C1 65,65,76 years, mixed 5.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.