Tissue expression of LAT - Staining in skin - The Human Protein Atlas

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LAT

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TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA SKIN

GENE/PROTEIN

Antibody validation

Dictionary
	Skin
	Anal skin


Tissue proteome
	Skin
	Extended skin samples

SKIN - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	12.9	TPM
GTEx:	5.4	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Not detected
Keratinocytes:	Not detected
Langerhans:	Not detected
Melanocytes:	Not detected

Antibody staining	Antibody HPA011157		Antibody CAB002223		Antibody CAB012978
Fibroblasts	Not detected		Not detected		Not detected
Keratinocytes	Not detected		Not detected		Not detected
Langerhans	Not detected		Not detected		Not detected
Melanocytes	Not detected		Not detected		Low

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Not detected

Antibody staining	Antibody HPA011157		Antibody CAB002223		Antibody CAB012978
Epidermal cells	Not detected		Not detected		Not detected

SKIN - HPA RNA-seq

Average TPM	12.9

overview

Female, age 34

Sample 1
TPM: 7.4

Cell types%

Keratinocytes: 60
Other cell types: 40

overview

Female, age 30

Sample 2
TPM: 7.3

Cell types%

Keratinocytes: 55
Other cell types: 45

N/A

Male, age 57

Sample 3
TPM: 24.1

SKIN - GTEx RNA-seq

Average RPKM	5.4

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 5.6

Samples: 250

Max RPKM: 16.7
Min RPKM: 1.8
Std RPKM: 2.1
Median RPKM: 5.3

GTEX-ZC5H-1526-SM-5HL9Y

40-49 years, female

16.7

GTEX-XBEC-0726-SM-4QARZ

50-59 years, male

15.3

GTEX-XPVG-2126-SM-4B667

50-59 years, male

11.3

GTEX-Y5V6-2326-SM-4VDSA

60-69 years, male

10.9

GTEX-13O3Q-0126-SM-5KM34

50-59 years, male

10.8

GTEX-ZTSS-1426-SM-5985P

40-49 years, male

10.4

GTEX-ZVT2-0126-SM-5GIDQ

50-59 years, female

10.4

GTEX-ZVTK-0226-SM-51MRG

20-29 years, male

10.4

GTEX-XUW1-0926-SM-4BONX

50-59 years, female

10.1

GTEX-XV7Q-1826-SM-4BRUV

40-49 years, female

9.2

Show all

Skin - Sun Exposed (Lower leg)
RPKM: 5.4

Samples: 357

Max RPKM: 27.9
Min RPKM: 1.5
Std RPKM: 2.4
Median RPKM: 4.8

GTEX-ZC5H-0226-SM-4WAY9

40-49 years, female

27.9

GTEX-R55F-0126-SM-48FCK

50-59 years, male

14.8

GTEX-139T4-0226-SM-5HL5S

50-59 years, female

13.1

GTEX-OXRL-0126-SM-2YUMP

50-59 years, male

12.6

GTEX-QDT8-0126-SM-48TZ1

30-39 years, female

12.2

GTEX-1192W-2626-SM-5Q5AF

60-69 years, male

12.1

GTEX-U3ZN-2326-SM-3DB7W

30-39 years, female

12.1

GTEX-111CU-1926-SM-5GZYZ

50-59 years, male

11.4

GTEX-V1D1-2226-SM-3NMAX

50-59 years, male

11.3

GTEX-X638-0126-SM-47JZ8

70-79 years, female

11.1

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.