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GTF2H4

COLON - Expression summary

RNA expression
HPA:1.3TPM
GTEx:11.2RPKM
FANTOM5:27.0Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

1.3
overview Male, age 54 Sample 1
TPM: 0.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 12.4
Samples: 149

Max RPKM: 48.8
Min RPKM: 5.5
Std RPKM: 4.5
Median RPKM: 11.6
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 48.8
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 31.2
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 22.2
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 18.8
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 18.3
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 18.1
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 18.1
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 17.5
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 17.1
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 17.1
Show all
Colon - Transverse
RPKM: 10.3
Samples: 196

Max RPKM: 24.4
Min RPKM: 2.4
Std RPKM: 2.5
Median RPKM: 9.9
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 24.4
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 17.9
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 17.4
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 17.3
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 17.2
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 15.7
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 15.5
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 15.0
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 14.9
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 14.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

27.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 27.0
FF:10014-101C5 62,83,84 years, mixed 27.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.