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REPIN1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:28.0TPM
GTEx:17.5RPKM
FANTOM5:24.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA036022

  

Adipocytes

 Not detected  

Chondrocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:High
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA036022

  

Adipocytes

 Not detected  

Fibroblasts

 High  

Peripheral nerve

 Low  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

28.0
N/A Female, age 80 Sample 1
TPM: 64.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 21.3
N/A Female, age 57 Sample 3
TPM: 22.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 20.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 10.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

17.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 17.8
Samples: 350

Max RPKM: 36.5
Min RPKM: 8.6
Std RPKM: 4.0
Median RPKM: 17.4
GTEX-R55G-2426-SM-2TC5I 40-49 years, female 36.5
GTEX-XUZC-1826-SM-4BRVO 30-39 years, female 33.6
GTEX-PX3G-0226-SM-3NB2C 20-29 years, female 30.0
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 28.8
GTEX-PWN1-0226-SM-5SI7O 40-49 years, female 28.8
GTEX-WY7C-2426-SM-3NB2V 50-59 years, male 27.5
GTEX-W5WG-2526-SM-4SOJ2 50-59 years, female 27.0
GTEX-Q2AG-0226-SM-2S1P4 40-49 years, female 26.7
GTEX-XUYS-0226-SM-47JX1 50-59 years, male 26.4
GTEX-SNOS-1426-SM-32PLY 40-49 years, male 26.3
Show all
Adipose - Visceral (Omentum)
RPKM: 17.0
Samples: 227

Max RPKM: 42.5
Min RPKM: 6.6
Std RPKM: 4.8
Median RPKM: 16.3
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 42.5
GTEX-ZYFC-1826-SM-5GZZA 50-59 years, male 34.6
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 29.8
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 29.7
GTEX-ZF2S-1526-SM-5S2OO 50-59 years, female 28.4
GTEX-13S86-0926-SM-5SI6I 40-49 years, male 27.1
GTEX-XV7Q-1726-SM-4BRUU 40-49 years, female 26.8
GTEX-ZYT6-2126-SM-5GZZ4 30-39 years, male 26.4
GTEX-13PDP-1226-SM-5K7TW 60-69 years, male 26.2
GTEX-13G51-0526-SM-5IJCQ 60-69 years, male 26.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

24.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 24.9
FF:10010-101C1 65,65,76 years, mixed 24.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.