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LYRM4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.8TPM
GTEx:1.7RPKM
FANTOM5:17.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA030362

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

9.8
overview Male, age 54 Sample 1
TPM: 9.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 8.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 7.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.0
Samples: 149

Max RPKM: 3.0
Min RPKM: 1.3
Std RPKM: 0.3
Median RPKM: 2.0
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 3.0
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 2.9
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 2.9
GTEX-145LS-2926-SM-5O99G 60-69 years, female 2.6
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 2.6
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 2.5
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 2.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 2.5
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 2.5
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 2.5
Show all
Colon - Transverse
RPKM: 1.5
Samples: 196

Max RPKM: 2.9
Min RPKM: 0.4
Std RPKM: 0.5
Median RPKM: 1.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 2.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 2.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 2.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 2.7
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 2.6
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 2.5
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 2.5
GTEX-1128S-1626-SM-5H12O 60-69 years, female 2.4
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 2.4
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 2.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

17.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 17.6
FF:10014-101C5 62,83,84 years, mixed 17.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.