We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PHB2
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:151.5TPM
GTEx:105.7RPKM
FANTOM5:97.8Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:High
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA039874

 

Antibody CAB014889

 

Antibody CAB026335

 

Adipocytes

High   Not detected   Not detected  

Glandular cells

High   High   High  

Myoepithelial cells

High   Medium   Medium  
     
     
     

BREAST - HPA RNA-seq

Average TPM

151.5

overview Female, age 52 Sample 1
TPM: 181.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 114.7
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 134.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 175
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

105.7

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 105.7
Samples: 214

Max RPKM: 198.4
Min RPKM: 69.6
Std RPKM: 22.0
Median RPKM: 103.2
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 198.4
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 190.2
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 182.8
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 177.3
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 166.3
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 158.9
GTEX-11P82-1326-SM-5HL62 20-29 years, male 154.0
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 152.0
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 150.7
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 150.2
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 148.9
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 148.6
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 148.0
GTEX-117YX-1426-SM-5H12H 50-59 years, male 141.3
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 134.8
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 134.7
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 134.2
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 133.8
GTEX-QEL4-2126-SM-447AE 50-59 years, male 132.8
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 131.8
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 131.2
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 131.0
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 131.0
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 130.4
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 130.1
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 129.0
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 128.9
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 128.3
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 127.6
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 127.4
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 126.8
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 125.7
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 125.6
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 125.2
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 124.8
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 124.7
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 124.0
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 123.4
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 123.3
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 122.7
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 122.3
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 122.1
GTEX-1192X-2326-SM-5987X 50-59 years, male 121.6
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 121.0
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 120.3
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 120.0
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 119.9
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 119.9
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 119.1
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 118.1
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 118.0
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 118.0
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 118.0
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 117.8
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 117.5
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 117.5
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 117.4
GTEX-S341-1526-SM-4AD6K 40-49 years, female 116.5
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 116.2
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 116.0
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 115.7
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 115.6
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 115.3
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 114.8
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 114.3
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 114.3
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 113.8
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 113.1
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 112.9
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 111.5
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 111.0
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 110.7
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 110.7
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 109.9
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 109.8
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 109.8
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 109.5
GTEX-13113-1726-SM-5GCOO 60-69 years, female 109.2
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 109.2
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 109.1
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 109.0
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 108.9
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 108.3
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 108.2
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 107.7
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 106.9
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 106.8
GTEX-11P81-1926-SM-5BC53 30-39 years, female 106.6
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 106.6
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 106.5
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 106.4
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 105.9
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 105.5
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 105.2
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 105.1
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 105.1
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 104.5
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 104.4
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 104.4
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 104.4
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 104.3
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 104.3
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 104.0
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 103.7
GTEX-QVJO-1826-SM-447C9 60-69 years, female 103.6
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 103.6
GTEX-111YS-1926-SM-5GICC 60-69 years, male 103.4
GTEX-1122O-1226-SM-5H113 60-69 years, female 103.0
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 102.9
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 102.6
GTEX-XBED-1626-SM-47JYN 60-69 years, male 102.4
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 102.2
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 102.1
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 101.9
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 101.9
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 101.5
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 100.6
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 100.5
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 99.9
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 99.7
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 98.6
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 98.4
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 97.9
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 97.8
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 97.3
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 97.1
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 96.9
GTEX-R55D-0826-SM-48FEA 50-59 years, male 96.7
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 96.7
GTEX-X261-0626-SM-3NMD9 50-59 years, male 96.6
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 96.4
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 96.1
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 95.6
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 95.5
GTEX-TML8-1226-SM-32QON 40-49 years, female 95.3
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 94.9
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 94.5
GTEX-REY6-2426-SM-48FF5 60-69 years, male 94.4
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 94.2
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 94.0
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 93.9
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 93.5
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 93.3
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 93.1
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 93.1
GTEX-144GM-0926-SM-5O994 20-29 years, male 93.1
GTEX-R53T-1526-SM-48FEK 50-59 years, female 93.1
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 92.9
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 92.8
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 92.5
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 92.4
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 92.3
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 92.2
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 92.1
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 91.7
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 91.7
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 91.7
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 91.7
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 91.6
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 91.4
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 91.3
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 90.9
GTEX-T6MN-0726-SM-32PML 50-59 years, male 90.2
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 90.1
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 89.8
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 89.5
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 88.8
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 88.4
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 88.4
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 87.9
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 87.5
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 87.4
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 87.3
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 87.3
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 87.1
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 86.9
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 86.9
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 86.5
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 85.9
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 84.8
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 84.7
GTEX-RU72-0626-SM-46MUI 50-59 years, female 84.5
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 84.1
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 83.6
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 83.5
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 83.4
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 83.3
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 83.1
GTEX-11EI6-0626-SM-5985T 60-69 years, male 83.0
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 83.0
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 82.4
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 81.8
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 81.6
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 81.5
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 81.2
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 79.5
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 79.3
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 79.1
GTEX-11OF3-1926-SM-59889 60-69 years, male 78.4
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 78.2
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 78.2
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 78.1
GTEX-WFON-1826-SM-3GILG 40-49 years, male 77.8
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 77.3
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 76.5
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 75.4
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 74.8
GTEX-117XS-1926-SM-5GICO 60-69 years, male 74.6
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 72.3
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 72.1
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 72.0
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 71.6
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 69.8
GTEX-14753-2426-SM-5LU8U 60-69 years, male 69.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

97.8

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 97.8
FF:10080-102A8 77 years, female 97.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.