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PHB2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:127.9TPM
GTEx:119.1RPKM
FANTOM5:201.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 
 

Antibody staining

Antibody HPA039874

  

Antibody CAB014889

  

Antibody CAB026335

  

Endothelial cells

 Low   Medium   Medium  

Glandular cells

 High   High   High  

Peripheral nerve/ganglion

 Low   Medium  
        
     
     
     

COLON - HPA RNA-seq

Average TPM

127.9
overview Male, age 54 Sample 1
TPM: 103.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 120.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 120.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 123.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 84.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 140.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 199.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 134.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 110.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 156.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 132.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 137.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 99
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

119.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 112.5
Samples: 149

Max RPKM: 210.3
Min RPKM: 54.6
Std RPKM: 22.5
Median RPKM: 111.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 210.3
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 183.8
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 171.0
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 165.5
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 159.7
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 153.6
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 148.4
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 147.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 147.6
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 144.4
Show all
Colon - Transverse
RPKM: 124.0
Samples: 196

Max RPKM: 185.2
Min RPKM: 46.0
Std RPKM: 23.6
Median RPKM: 125.0
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 185.2
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 183.1
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 177.1
GTEX-1128S-1626-SM-5H12O 60-69 years, female 176.4
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 174.2
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 172.4
GTEX-QMRM-1226-SM-447C6 50-59 years, male 170.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 169.0
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 168.3
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 166.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

201.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 201.2
FF:10014-101C5 62,83,84 years, mixed 201.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.