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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:123.9TPM
GTEx:51.1RPKM
FANTOM5:288.1Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA001648

  

Antibody HPA005631

  

Antibody HPA059585

  

Squamous epithelial cells

 Low   Low   Medium  
     
     
     

ESOPHAGUS - HPA RNA-seq

Average TPM

123.9
overview Female, age 70 Sample 1
TPM: 128.6
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 121.7
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 121.4
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

51.1

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 51.1
Samples: 286

Max RPKM: 89.0
Min RPKM: 21.1
Std RPKM: 12.6
Median RPKM: 51.9
GTEX-S4P3-0426-SM-4AD56 50-59 years, female 89.0
GTEX-13RTK-0526-SM-5S2QF 20-29 years, male 87.9
GTEX-14BMU-0926-SM-5S2QB 20-29 years, female 83.2
GTEX-145ME-0526-SM-5QGQV 40-49 years, female 81.8
GTEX-T5JW-1326-SM-4DM5G 20-29 years, female 80.8
GTEX-13FH7-0526-SM-5IJF8 50-59 years, female 79.1
GTEX-12KS4-0926-SM-5BC5S 30-39 years, male 77.6
GTEX-144GM-1426-SM-5LU31 20-29 years, male 74.6
GTEX-11I78-1526-SM-5A5K7 50-59 years, female 74.1
GTEX-131XG-1026-SM-5GCMX 50-59 years, female 74.1
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

288.1

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 288.1
FF:10015-101C6 68,74,75 years, mixed 288.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.