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PHGR1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1475.8TPM
GTEx:829.8RPKM
FANTOM5:2155.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
 

Antibody staining

Antibody HPA068787

  

Endothelial cells

 Not detected  

Glandular cells

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

1475.8
overview Male, age 54 Sample 1
TPM: 1774.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2360.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3989.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4733.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 985.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 433.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 605.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 563.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 270.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1216.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 712.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 895.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 644.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

829.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 19.2
Samples: 149

Max RPKM: 453.2
Min RPKM: 0.0
Std RPKM: 60.8
Median RPKM: 2.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 453.2
GTEX-XBED-1726-SM-47JYO 60-69 years, male 364.3
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 341.5
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 193.3
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 165.0
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 150.9
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 136.1
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 104.9
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 85.3
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 78.4
Show all
Colon - Transverse
RPKM: 1446.1
Samples: 196

Max RPKM: 6397.8
Min RPKM: 0.0
Std RPKM: 1328.5
Median RPKM: 1317.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 6397.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 5023.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 4734.1
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 4710.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 4541.1
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 4444.5
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 4424.2
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 4414.2
GTEX-TKQ2-1326-SM-4DXT9 50-59 years, male 4202.9
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 4062.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

2155.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 2155.5
FF:10014-101C5 62,83,84 years, mixed 2155.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.