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CLEC2L

GENERAL INFORMATION

Gene name

 CLEC2L

Gene description

 C-type lectin domain family 2, member L

Protein class

 Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

 Intracellular,Membrane

Number of transcripts

 2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Group enriched (cerebral cortex, parathyroid gland)
GTEx:Group enriched (caudate, cerebellum, cerebral cortex, hippocampus, hypothalamus)
FANTOM5:Group enriched (brain, caudate, cerebellum, hippocampus, retina)

Protein evidence

 Evidence at protein level

Protein expression

 Selective expression in CNS.

DATA RELIABILITY

Data reliability
description

 Pending external verification.

Reliability score

 Supported based on 1 antibody.
HPA045050
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Cerebellum

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (cerebral cortex, parathyroid gland)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (caudate, cerebellum, cerebral cortex, hippocampus, hypothalamus)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (brain, caudate, cerebellum, hippocampus, retina)

GENE INFORMATION

Gene name

 CLEC2L (HGNC Symbol)

Synonyms

 FLJ32986

Description

 C-type lectin domain family 2, member L (HGNC Symbol)

Entrez gene summary

Chromosome

 7

Cytoband

 q34

Chromosome location (bp)

 139523856 - 139544984

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000236279 (version 83.38)

Entrez gene

 154790

UniProt

 P0C7M8 (UniProt - Inferred from homology)

neXtProt

 NX_P0C7M8

Antibodypedia

 CLEC2L antibodies

PROTEIN BROWSER
CLEC2L-001
CLEC2L-003

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
CLEC2L-001
ENSP00000390661
ENST00000422142
P0C7M8 [Direct mapping]
C-type lectin domain family 2 member L
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Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Kim et al 2014)
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GO:0016021 [integral component of membrane]
GO:0030246 [carbohydrate binding]
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 214 aa
23.9 kDa 		No 1
CLEC2L-003
ENSP00000428508
ENST00000521281
H0YB20 [Direct mapping]
C-type lectin domain family 2 member L
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Predicted intracellular proteins
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 108 aa
12.5 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.