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TNFSF12

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.8TPM
GTEx:50.2RPKM
FANTOM5:45.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA052967

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

6.8
overview Male, age 54 Sample 1
TPM: 9.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 10
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

50.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 72.4
Samples: 149

Max RPKM: 129.2
Min RPKM: 21.0
Std RPKM: 20.7
Median RPKM: 71.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 129.2
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 121.2
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 118.4
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 117.6
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 117.4
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 115.3
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 114.7
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 114.4
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 114.2
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 108.7
Show all
Colon - Transverse
RPKM: 33.3
Samples: 196

Max RPKM: 88.3
Min RPKM: 4.8
Std RPKM: 22.0
Median RPKM: 27.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 88.3
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 87.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 86.1
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 84.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 84.7
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 82.9
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 81.6
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 81.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 80.7
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 80.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

45.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 45.8
FF:10014-101C5 62,83,84 years, mixed 45.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.