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MRPL20

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:89.5TPM
GTEx:27.1RPKM
FANTOM5:86.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA047074

  

Endothelial cells

 High  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

89.5
overview Male, age 54 Sample 1
TPM: 81.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 93.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 91.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 98.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 94.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 125
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 110.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 84.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 86.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 75.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 76.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 76.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 67.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

27.1

GTEx sample id

Sample description

RPKM
25.528.932.718.639.305101520253035404550
Colon - Sigmoid
RPKM: 29.2
Samples: 149

Max RPKM: 51.6
Min RPKM: 18.6
Std RPKM: 5.1
Median RPKM: 28.9
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 51.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 47.7
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 39.3
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 39.2
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 38.4
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 38.3
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 37.5
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 36.8
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 36.6
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 36.4
Show all
21.724.828.913.439.30510152025303540
Colon - Transverse
RPKM: 25.4
Samples: 196

Max RPKM: 42.3
Min RPKM: 10.7
Std RPKM: 5.4
Median RPKM: 24.8
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 42.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 41.4
GTEX-QMRM-1226-SM-447C6 50-59 years, male 39.3
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 38.8
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 36.9
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 36.7
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 36.4
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 36.3
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 35.4
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 34.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

86.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 86.0
FF:10014-101C5 62,83,84 years, mixed 86.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.