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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:101.4TPM
GTEx:54.1RPKM
FANTOM5:66.1Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA046841

  

Antibody HPA052867

  

Antibody CAB009746

  

Squamous epithelial cells

 Low   Medium   Medium  
     
     
     

ESOPHAGUS - HPA RNA-seq

Average TPM

101.4
overview Female, age 70 Sample 1
TPM: 114
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 92.9
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 97.2
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

54.1

GTEx sample id

Sample description

RPKM
46.554.360.129.377.00102030405060708090
Esophagus - Mucosa
RPKM: 54.1
Samples: 286

Max RPKM: 92.5
Min RPKM: 29.3
Std RPKM: 10.3
Median RPKM: 54.3
GTEX-RUSQ-0826-SM-47JWW 50-59 years, male 92.5
GTEX-XGQ4-1526-SM-4AT6H 50-59 years, male 88.8
GTEX-TMMY-1126-SM-4DXSX 40-49 years, female 84.5
GTEX-13X6H-1326-SM-5LU42 50-59 years, female 77.0
GTEX-WOFM-0626-SM-4OOS3 20-29 years, male 75.4
GTEX-11EM3-0826-SM-5N9CC 20-29 years, female 74.6
GTEX-13CF3-1626-SM-5IFG9 60-69 years, female 73.9
GTEX-R55D-1126-SM-48FEB 50-59 years, male 73.7
GTEX-S32W-0926-SM-4AD5X 50-59 years, female 73.7
GTEX-ZTX8-0226-SM-5E44D 20-29 years, male 73.3
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

66.1

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 66.1
FF:10015-101C6 68,74,75 years, mixed 66.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.