We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
HBB
  • premium

    TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:840.8TPM
GTEx:194.0RPKM
FANTOM5:549.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA043234

 

Antibody CAB009526

 

Adipocytes

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Myoepithelial cells

Not detected   Not detected  
   
   
   

BREAST - HPA RNA-seq

Average TPM

840.8

overview Female, age 52 Sample 1
TPM: 58.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 2934.4
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 348.5
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 21.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

194.0

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 194.0
Samples: 214

Max RPKM: 2294.7
Min RPKM: 4.1
Std RPKM: 341.4
Median RPKM: 74.7
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 2294.7
GTEX-QVJO-1826-SM-447C9 60-69 years, female 1847.2
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 1841.6
GTEX-1192X-2326-SM-5987X 50-59 years, male 1777.4
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 1691.8
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 1643.8
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 1208.4
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 1057.7
GTEX-14753-2426-SM-5LU8U 60-69 years, male 941.5
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 770.6
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 746.8
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 731.7
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 664.9
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 652.3
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 611.5
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 611.2
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 610.0
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 564.6
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 546.9
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 499.1
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 463.5
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 416.2
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 409.3
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 408.5
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 400.7
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 391.0
GTEX-144GM-0926-SM-5O994 20-29 years, male 355.0
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 351.7
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 341.1
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 338.8
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 326.1
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 312.4
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 307.8
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 297.9
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 293.4
GTEX-X261-0626-SM-3NMD9 50-59 years, male 287.7
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 286.4
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 286.0
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 280.6
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 270.1
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 268.9
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 267.4
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 261.0
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 253.0
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 247.8
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 242.0
GTEX-REY6-2426-SM-48FF5 60-69 years, male 241.2
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 236.0
GTEX-117XS-1926-SM-5GICO 60-69 years, male 231.0
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 220.2
GTEX-QEL4-2126-SM-447AE 50-59 years, male 214.2
GTEX-RU72-0626-SM-46MUI 50-59 years, female 213.5
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 207.7
GTEX-11EI6-0626-SM-5985T 60-69 years, male 201.0
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 199.8
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 195.0
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 181.7
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 179.0
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 172.4
GTEX-13113-1726-SM-5GCOO 60-69 years, female 167.4
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 167.3
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 165.1
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 162.4
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 161.9
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 156.8
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 155.6
GTEX-11OF3-1926-SM-59889 60-69 years, male 152.1
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 150.3
GTEX-R53T-1526-SM-48FEK 50-59 years, female 148.0
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 146.4
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 145.9
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 140.7
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 140.3
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 139.6
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 137.6
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 133.9
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 128.8
GTEX-11P82-1326-SM-5HL62 20-29 years, male 122.7
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 119.4
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 115.4
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 114.2
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 113.4
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 108.2
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 103.0
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 101.9
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 100.5
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 98.2
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 96.8
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 95.8
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 95.7
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 93.2
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 91.8
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 89.3
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 89.2
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 89.0
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 88.8
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 85.4
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 84.8
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 84.4
GTEX-TML8-1226-SM-32QON 40-49 years, female 83.6
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 83.4
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 82.8
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 81.1
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 78.8
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 76.9
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 75.5
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 74.8
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 74.6
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 73.4
GTEX-R55D-0826-SM-48FEA 50-59 years, male 71.2
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 69.3
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 68.5
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 66.2
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 65.7
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 65.2
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 64.7
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 64.6
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 64.1
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 63.7
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 63.2
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 62.7
GTEX-XBED-1626-SM-47JYN 60-69 years, male 61.4
GTEX-11P81-1926-SM-5BC53 30-39 years, female 60.3
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 59.7
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 58.0
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 57.6
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 55.0
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 54.7
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 53.7
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 53.6
GTEX-T6MN-0726-SM-32PML 50-59 years, male 53.4
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 52.8
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 52.8
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 52.3
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 52.0
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 51.5
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 49.7
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 49.5
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 49.4
GTEX-S341-1526-SM-4AD6K 40-49 years, female 48.7
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 47.4
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 47.2
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 47.2
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 46.0
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 45.8
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 45.6
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 45.3
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 44.7
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 43.7
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 42.7
GTEX-WFON-1826-SM-3GILG 40-49 years, male 41.0
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 40.9
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 40.5
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 40.1
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 39.6
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 36.2
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 36.0
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 34.8
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 34.7
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 31.0
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 30.9
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 27.9
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 27.8
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 26.4
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 26.4
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 26.2
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 25.9
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 25.2
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 25.0
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 23.3
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 22.0
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 21.0
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 20.6
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 20.2
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 20.2
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 19.6
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 18.9
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 18.6
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 17.4
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 17.0
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 16.8
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 15.4
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 15.2
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 15.0
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 14.5
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 14.3
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 14.2
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 14.0
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 13.5
GTEX-1122O-1226-SM-5H113 60-69 years, female 13.3
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 13.2
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 12.8
GTEX-117YX-1426-SM-5H12H 50-59 years, male 12.4
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 12.3
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 12.0
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 11.9
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 11.2
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 11.1
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 10.8
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 9.9
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 9.6
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 9.1
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 8.9
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 8.1
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 8.0
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 7.5
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 7.3
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 7.1
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 6.6
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 6.2
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 6.1
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 6.0
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 5.4
GTEX-111YS-1926-SM-5GICC 60-69 years, male 4.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

549.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 549.9
FF:10080-102A8 77 years, female 549.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.