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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:85.2TPM
GTEx:159.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA043234

 

Antibody CAB009526

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

85.2

N/A Male, age 5 Sample 1
TPM: 120.5
overview Female, age 40 Sample 2
TPM: 74.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 60.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

159.2

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 154.7
Samples: 114

Max RPKM: 1792.9
Min RPKM: 7.3
Std RPKM: 269.4
Median RPKM: 72.6
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 1792.9
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 1707.6
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 1086.7
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 897.5
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 690.1
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 482.0
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 458.7
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 419.5
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 415.2
GTEX-144FL-3026-SM-5O99C 50-59 years, male 410.6
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 408.2
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 350.5
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 319.0
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 306.9
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 262.2
GTEX-145MF-2726-SM-5O995 50-59 years, male 257.0
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 256.9
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 224.8
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 204.0
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 181.4
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 178.4
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 168.0
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 165.8
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 163.4
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 162.6
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 153.8
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 151.9
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 150.4
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 141.4
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 139.8
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 138.9
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 137.5
GTEX-11GSP-3226-SM-5986O 60-69 years, female 135.6
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 124.5
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 118.5
GTEX-1128S-2726-SM-5H12C 60-69 years, female 114.3
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 112.8
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 112.6
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 111.9
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 110.8
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 109.3
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 109.0
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 106.5
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 102.2
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 101.8
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 99.9
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 95.6
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 94.0
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 91.3
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 89.1
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 87.0
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 84.0
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 79.9
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 77.4
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 76.1
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 75.3
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 73.7
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 71.6
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 69.5
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 64.0
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 63.8
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 61.7
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 61.1
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 61.0
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 60.2
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 58.4
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 58.0
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 57.2
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 55.4
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 55.0
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 51.6
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 49.8
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 48.1
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 47.7
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 46.9
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 45.8
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 45.4
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 44.6
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 44.5
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 42.5
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 42.0
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 40.9
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 39.7
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 38.9
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 38.6
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 37.7
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 35.0
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 34.2
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 33.5
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 33.1
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 33.1
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 32.8
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 31.4
GTEX-X585-3026-SM-46MWF 50-59 years, male 31.2
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 31.0
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 30.4
GTEX-11PRG-2926-SM-5987A 50-59 years, male 28.6
GTEX-WL46-2926-SM-3LK82 50-59 years, male 27.8
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 27.6
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 24.3
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 23.5
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 22.9
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 21.4
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 19.3
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 19.3
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 19.0
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 14.2
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 13.5
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 13.2
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 13.0
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 11.8
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 11.3
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 10.1
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 7.3
Show all
Brain - Frontal Cortex (BA9)
RPKM: 164.1
Samples: 108

Max RPKM: 1128.5
Min RPKM: 5.1
Std RPKM: 206.5
Median RPKM: 89.9
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 1128.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 1082.5
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 768.6
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 710.7
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 698.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 666.8
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 643.9
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 558.1
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 510.6
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 405.9
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 352.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 321.3
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 308.8
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 296.4
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 292.6
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 285.8
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 282.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 276.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 267.5
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 258.8
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 258.3
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 251.9
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 246.8
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 214.5
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 198.8
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 194.7
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 190.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 189.2
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 183.7
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 175.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 173.9
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 163.5
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 162.5
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 161.8
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 158.9
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 158.0
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 150.4
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 147.7
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 146.0
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 142.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 141.6
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 136.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 135.9
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 135.6
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 127.0
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 126.4
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 119.5
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 110.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 103.0
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 100.3
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 99.0
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 96.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 94.5
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 91.2
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 88.6
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 84.3
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 81.4
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 80.4
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 79.9
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 79.8
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 79.6
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 75.8
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 74.2
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 72.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 72.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 69.8
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 67.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 66.5
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 58.2
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 56.1
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 53.5
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 51.0
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 49.0
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 49.0
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 47.8
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 47.1
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 46.2
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 43.1
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 42.6
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 37.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 37.7
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 34.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 33.3
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 31.4
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 31.1
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 30.9
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 30.6
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 29.1
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 28.8
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 28.1
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 28.1
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 28.0
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 27.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 27.1
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 26.2
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 26.0
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 24.8
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 22.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 18.7
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 18.6
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 18.5
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 16.0
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 15.2
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 12.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 10.5
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 10.5
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 9.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 5.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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