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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:269.8TPM
GTEx:81.0RPKM
FANTOM5:121.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA043234

  

Antibody CAB009526

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

269.8
overview Male, age 54 Sample 1
TPM: 101.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 151.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 937.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 43.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 172.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 766.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 142.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 36.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 234.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 691.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 203.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

81.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 78.4
Samples: 149

Max RPKM: 1144.1
Min RPKM: 0.4
Std RPKM: 158.4
Median RPKM: 24.1
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 1144.1
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 789.6
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 749.2
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 583.7
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 558.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 497.4
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 496.5
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 437.8
GTEX-145LS-2926-SM-5O99G 60-69 years, female 420.7
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 232.9
Show all
Colon - Transverse
RPKM: 82.9
Samples: 196

Max RPKM: 3176.4
Min RPKM: 0.1
Std RPKM: 305.9
Median RPKM: 11.5
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 3176.4
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 2337.2
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 1047.2
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 844.9
GTEX-1128S-1626-SM-5H12O 60-69 years, female 766.4
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 619.1
GTEX-PLZ6-0926-SM-3P5ZQ 30-39 years, male 528.3
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 344.7
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 307.0
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 304.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

121.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 121.9
FF:10014-101C5 62,83,84 years, mixed 121.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.