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FXYD1

COLON - Expression summary

RNA expression
HPA:42.0TPM
GTEx:33.0RPKM
FANTOM5:59.9Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

42.0
overview Male, age 54 Sample 1
TPM: 20.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 32.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 64.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 37.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 60.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 34.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 27
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 67
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 23.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 45.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 58.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 63.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

33.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 46.8
Samples: 149

Max RPKM: 148.1
Min RPKM: 9.9
Std RPKM: 22.4
Median RPKM: 43.1
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 148.1
GTEX-145LS-2926-SM-5O99G 60-69 years, female 116.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 108.8
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 108.1
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 94.8
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 91.7
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 88.1
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 84.6
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 82.5
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 81.8
Show all
Colon - Transverse
RPKM: 22.5
Samples: 196

Max RPKM: 104.6
Min RPKM: 1.9
Std RPKM: 19.9
Median RPKM: 16.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 104.6
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 97.8
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 95.2
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 91.0
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 82.2
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 82.0
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 78.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 77.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 68.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 67.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

59.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 59.9
FF:10014-101C5 62,83,84 years, mixed 59.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.