We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
NBPF9
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

NBPF9

Gene description

Neuroblastoma breakpoint family, member 9

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

8
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression in several tissues types.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification. Caution, targets protein from more than one gene.

Reliability score

Approved based on 7 antibodies.
HPA038748 , HPA042595 , HPA043105 , HPA043692 , HPA044023 , HPA046971 , HPA058050
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

NBPF9 (HGNC Symbol)

Synonyms

AE01

Description

Neuroblastoma breakpoint family, member 9 (HGNC Symbol)

Entrez gene summary

This gene is a member of the neuroblastoma breakpoint family (NBPF) which consists of dozens of recently duplicated genes primarily located in segmental duplications on human chromosome 1. This gene family has experienced its greatest expansion within the human lineage and has expanded, to a lesser extent, among primates in general. Members of this gene family are characterized by tandemly repeated copies of DUF1220 protein domains. Gene copy number variations in the human chromosomal region 1q21.1, where most DUF1220 domains are located, have been implicated in a number of developmental and neurogenetic diseases such as microcephaly, macrocephaly, autism, schizophrenia, mental retardation, congenital heart disease, neuroblastoma, and congenital kidney and urinary tract anomalies. Altered expression of some gene family members is associated with several types of cancer. This gene family contains numerous pseudogenes. [provided by RefSeq, Apr 2013]

Chromosome

1

Cytoband

q21.2

Chromosome location (bp)

149054027 - 149103561

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000269713 (version 83.38)

Entrez gene

400818

UniProt

neXtProt

Antibodypedia

NBPF9 antibodies

PROTEIN BROWSER

NBPF9-002
NBPF9-007
NBPF9-008
NBPF9-201
NBPF9-202
NBPF9-203
NBPF9-204
NBPF9-205

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

NBPF9-002
ENSP00000477979
ENST00000615421
A0A075B761 [Direct mapping]
Neuroblastoma breakpoint family member 9
Show all
Predicted intracellular proteins
Show all
1111 aa
127.8 kDa
No 0
NBPF9-007
ENSP00000482587
ENST00000621645
A0A087WZE1 [Direct mapping]
Neuroblastoma breakpoint family member 9
Show all
Predicted intracellular proteins
Show all
981 aa
113.1 kDa
No 0
NBPF9-008
ENSP00000481471
ENST00000610300
A0A087WY26 [Direct mapping]
Neuroblastoma breakpoint family member 9
Show all
Predicted intracellular proteins
Show all
942 aa
108.4 kDa
No 0
NBPF9-201
ENSP00000483736
ENST00000483630
A0A087X0Y3 [Direct mapping]
Neuroblastoma breakpoint family member 9
Show all
Predicted intracellular proteins
Show all
299 aa
34.1 kDa
No 0
NBPF9-202
ENSP00000463665
ENST00000584027
A0A075B761 [Direct mapping]
Neuroblastoma breakpoint family member 9
Show all
Predicted intracellular proteins
Show all
1111 aa
127.8 kDa
No 0
NBPF9-203
ENSP00000483900
ENST00000613595
A0A087WY26 [Direct mapping]
Neuroblastoma breakpoint family member 9
Show all
Predicted intracellular proteins
Show all
942 aa
108.4 kDa
No 0
NBPF9-204
ENSP00000482016
ENST00000613969
A0A087WYQ9 [Direct mapping]
Neuroblastoma breakpoint family member 9
Show all
Predicted intracellular proteins
Show all
942 aa
108.4 kDa
No 0
NBPF9-205
ENSP00000479415
ENST00000621074
A0A087WVG0 [Direct mapping]
Neuroblastoma breakpoint family member 9
Show all
Predicted intracellular proteins
Show all
867 aa
99.8 kDa
No 0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.