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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:8.0TPM
GTEx:4.6RPKM
FANTOM5:9.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Low
 

Antibody staining

Antibody HPA005624

  

Squamous epithelial cells

 Not detected  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

8.0
overview Female, age 70 Sample 1
TPM: 8.3
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 8
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 7.8
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

4.6

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 4.6
Samples: 286

Max RPKM: 7.4
Min RPKM: 1.5
Std RPKM: 1.1
Median RPKM: 4.6
GTEX-ZF3C-1626-SM-4WWB4 50-59 years, female 7.4
GTEX-ZT9X-0526-SM-5GCOP 40-49 years, male 7.4
GTEX-13FHO-1726-SM-5IFGM 60-69 years, male 7.1
GTEX-PSDG-1326-SM-48TD2 50-59 years, male 6.9
GTEX-U3ZH-1026-SM-4DXUZ 30-39 years, male 6.9
GTEX-ZVE2-1326-SM-5NQ94 50-59 years, male 6.9
GTEX-R53T-1126-SM-48FD4 50-59 years, female 6.8
GTEX-Y8LW-0726-SM-5IFI1 50-59 years, female 6.8
GTEX-S32W-0926-SM-4AD5X 50-59 years, female 6.7
GTEX-ZYWO-1026-SM-5E45U 40-49 years, female 6.7
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

9.8

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 9.8
FF:10015-101C6 68,74,75 years, mixed 9.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.