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ABCB4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.8TPM
GTEx:0.4RPKM
FANTOM5:1.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA049395

  

Antibody HPA053288

  

Endothelial cells

 Not detected   Low  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

0.8
overview Male, age 54 Sample 1
TPM: 0.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.5
Samples: 149

Max RPKM: 2.5
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.3
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 2.5
GTEX-145LS-2926-SM-5O99G 60-69 years, female 2.4
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 1.4
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 1.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 1.4
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 1.3
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 1.2
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 1.2
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 1.2
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 1.1
Show all
Colon - Transverse
RPKM: 0.3
Samples: 196

Max RPKM: 1.4
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 1.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 1.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 1.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 1.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 1.1
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 1.0
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 0.9
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 0.9
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 0.8
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 0.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

1.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 1.2
FF:10014-101C5 62,83,84 years, mixed 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.