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TAC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.3TPM
GTEx:5.0RPKM
FANTOM5:8.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA014429

  

Antibody CAB004588

  

Endothelial cells

 Low   Not detected  

Glandular cells

 Medium   Not detected  

Peripheral nerve/ganglion

 High   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

4.3
overview Male, age 54 Sample 1
TPM: 2.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 12.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.2
Samples: 149

Max RPKM: 37.8
Min RPKM: 0.3
Std RPKM: 6.2
Median RPKM: 5.6
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 37.8
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 35.6
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 28.8
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 27.0
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 26.8
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 20.6
GTEX-13111-1926-SM-5GCOL 50-59 years, male 19.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 18.4
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 18.1
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 16.8
Show all
Colon - Transverse
RPKM: 3.3
Samples: 196

Max RPKM: 52.1
Min RPKM: 0.0
Std RPKM: 5.1
Median RPKM: 1.7
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 52.1
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 25.0
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 19.1
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 16.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 16.2
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 14.0
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 13.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 12.4
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 12.0
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 11.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.6
FF:10014-101C5 62,83,84 years, mixed 8.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.