Tissue expression of NFIX - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	80.7	TPM
GTEx:	23.5	RPKM
FANTOM5:	101.0	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA007533
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	80.7

Female, age 70

Sample 1
TPM: 88.8

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 76.2

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 77.1

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	23.5

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 23.5

Samples: 286

Max RPKM: 48.2
Min RPKM: 11.7
Std RPKM: 5.7
Median RPKM: 22.9

GTEX-RU72-0726-SM-46MUW

50-59 years, female

48.2

GTEX-Y111-1626-SM-57WCY

50-59 years, male

45.5

GTEX-R45C-1226-SM-48FEE

60-69 years, female

42.6

GTEX-RNOR-1226-SM-48FDQ

50-59 years, female

42.1

GTEX-145LS-1826-SM-5LUAZ

60-69 years, female

38.9

GTEX-1212Z-2126-SM-5FQTM

60-69 years, male

38.8

GTEX-139TU-1226-SM-5J2NL

60-69 years, male

38.0

GTEX-WK11-1026-SM-4OOS8

50-59 years, male

36.9

GTEX-1399U-1026-SM-5J1OC

50-59 years, female

36.7

GTEX-T2IS-0826-SM-4DM6L

20-29 years, female

36.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	101.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 101.0

FF:10015-101C6

68,74,75 years, mixed

101.0