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CD9

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:478.6TPM
GTEx:115.3RPKM
FANTOM5:289.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody CAB002490

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 High  
 

COLON - HPA RNA-seq

Average TPM

478.6
overview Male, age 54 Sample 1
TPM: 422.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 532.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 527.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 666.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 296.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 518.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 567.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 470.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 303.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 612.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 477.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 471.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 356
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

115.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 93.8
Samples: 149

Max RPKM: 190.9
Min RPKM: 42.3
Std RPKM: 25.6
Median RPKM: 88.6
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 190.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 182.4
GTEX-12696-1926-SM-5EGJT 60-69 years, male 164.5
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 163.8
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 149.4
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 147.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 145.3
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 142.3
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 141.5
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 137.8
Show all
Colon - Transverse
RPKM: 131.7
Samples: 196

Max RPKM: 272.4
Min RPKM: 39.1
Std RPKM: 45.1
Median RPKM: 128.9
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 272.4
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 261.2
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 242.8
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 236.5
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 220.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 220.3
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 217.5
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 211.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 210.3
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 210.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

289.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 289.5
FF:10014-101C5 62,83,84 years, mixed 289.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.