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Gene name

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Method

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Method

Validation

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Score

Score

Score

Antibodies

Column

 
 
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CD74
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

193.6 FPKM 333.6 FPKM

3-year survival high

50% 54%

3-year survival low

0% 21%

Log-rank P value

1.54e-2 3.43e-2

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

660.1

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 3556.0
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 3226.2
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 3028.5
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 2664.2
TCGA-YG-AA3N-01A 67 years, male, stage:iic 2529.1
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 2520.9
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 2468.8
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 2463.9
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 2349.7
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 2213.3
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 2178.9
TCGA-ER-A194-01A 77 years, male, white 1549.8
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 1547.6
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 1420.7
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 1308.5
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 1282.8
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 1192.3
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 1093.7
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 1084.0
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 1080.2
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 1069.2
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 1052.2
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 1010.4
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 942.8
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 817.3
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 800.8
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 767.6
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 764.4
TCGA-EB-A299-01A 63 years, male, white, stage:iia 723.7
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 637.6
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 629.8
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 629.1
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 628.9
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 626.0
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 622.4
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 575.7
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 561.7
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 501.2
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 496.9
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 428.5
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 424.7
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 418.6
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 415.5
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 414.8
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 392.8
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 392.3
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 389.8
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 366.7
TCGA-EB-A550-01A 75 years, female, white, stage:iic 359.8
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 351.7
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 349.0
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 318.3
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 317.0
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 312.3
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 287.3
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 282.3
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 278.5
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 272.2
TCGA-EB-A553-01A 62 years, male, white, stage:iic 264.4
TCGA-GN-A263-01A 24 years, male, white, stage:iv 246.7
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 235.0
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 232.0
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 229.6
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 217.8
TCGA-ER-A196-01A 64 years, female, white, stage:iic 194.7
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 193.8
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 193.5
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 189.7
TCGA-FR-A726-01A 90 years, male, white, stage:iic 186.7
TCGA-ER-A42H-01A 77 years, male, white 176.1
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 172.8
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 172.6
TCGA-EB-A431-01A 34 years, male, white, stage:iic 158.0
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 154.6
TCGA-HR-A5NC-01A 90 years, female 144.2
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 140.6
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 138.1
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 130.3
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 127.6
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 126.4
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 126.3
TCGA-GF-A769-01A 39 years, male, white, stage:iic 123.8
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 118.9
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 118.1
TCGA-EB-A24C-01A 56 years, male, white 108.5
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 101.2
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 99.8
TCGA-DA-A960-01A 73 years, male, white, stage:iib 99.4
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 98.7
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 97.2
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 89.8
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 84.8
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 83.7
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 82.6
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 82.4
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 78.6
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 66.1
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 63.1
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 60.8
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 59.9
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 40.0
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 36.7
Show all

MELANOMA - Protein expression

 

Antibody HPA010592

Antibody CAB002506

 Antibody staining
  High
  Medium
  Low
  Not detected
   
 Intensity
  Strong
  Moderate
  Weak
  Negative
   
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
   
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
   

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