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BIRC3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.4TPM
GTEx:7.1RPKM
FANTOM5:29.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA002317

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

19.4
overview Male, age 54 Sample 1
TPM: 15
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 24.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 39.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 21.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 16.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 28.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 14.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 24.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 15.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.1
Samples: 149

Max RPKM: 14.6
Min RPKM: 1.4
Std RPKM: 2.3
Median RPKM: 4.4
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 14.6
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 12.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 12.6
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 11.4
GTEX-145LS-2926-SM-5O99G 60-69 years, female 10.7
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 10.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 10.6
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 10.3
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 9.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 9.3
Show all
Colon - Transverse
RPKM: 8.6
Samples: 196

Max RPKM: 139.0
Min RPKM: 2.0
Std RPKM: 10.9
Median RPKM: 6.5
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 139.0
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 42.8
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 35.8
GTEX-XUZC-1326-SM-4BRV2 30-39 years, female 28.8
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 24.0
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 22.8
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 21.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 20.6
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 20.2
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 18.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

29.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 29.9
FF:10014-101C5 62,83,84 years, mixed 29.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.