We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
BIRC3
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:84.9TPM
GTEx:28.8RPKM
FANTOM5:116.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA002317

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

84.9

overview Male, age 65 Sample 1
TPM: 15.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 158.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 91.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 73.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

28.8

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 28.8
Samples: 88

Max RPKM: 89.5
Min RPKM: 3.1
Std RPKM: 19.7
Median RPKM: 21.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 89.5
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 80.3
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 79.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 78.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 73.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 66.8
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 60.7
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 55.6
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 55.6
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 54.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 52.1
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 51.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 50.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 49.0
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 48.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 47.9
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 46.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 45.5
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 44.6
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 42.2
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 42.2
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 40.2
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 39.6
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 39.3
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 39.3
GTEX-1122O-1326-SM-5H11F 60-69 years, female 38.1
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 37.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 36.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 35.4
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 34.0
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 32.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 31.9
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 31.4
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 30.4
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 29.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 27.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 27.4
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 27.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 26.4
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 25.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 24.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 23.1
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 22.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 22.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 21.3
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 21.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 20.8
GTEX-ZTSS-0926-SM-59865 40-49 years, male 20.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 20.0
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 19.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 19.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 19.1
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 19.0
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 18.8
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 18.1
GTEX-13O61-1326-SM-5KM31 60-69 years, male 17.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 17.8
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 17.2
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 17.1
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 16.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 16.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 15.8
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 15.5
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 15.4
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 15.2
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 15.2
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 15.2
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 14.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 14.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 14.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 14.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 12.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 11.4
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 10.3
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 9.2
GTEX-1192X-2526-SM-59868 50-59 years, male 9.0
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 8.7
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 8.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 8.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 6.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 6.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 6.0
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 5.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 5.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 5.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 5.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 4.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 3.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

116.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 116.5
FF:10024-101D6 15,40,85 years, mixed 116.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.