Tissue expression of VIM - Staining in liver

LIVER - Expression summary

Protein expression

RNA expression

HPA:	100.4	TPM
GTEx:	23.6	RPKM
FANTOM5:	168.8	Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:	Low
Hepatocytes:	Not detected

Antibody staining	Antibody HPA001762	Antibody CAB000080	Antibody CAB058687
Bile duct cells	Medium	Low	Not detected
Hepatocytes	Not detected	Not detected	Not detected

LIVER - HPA RNA-seq

Average TPM	100.4

Female, age 60

Sample 1
TPM: 126

Male, age 54

Sample 2
TPM: 175.1

Cell types%

Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5

Male, age 74

Sample 3
TPM: 89.8

Cell types%

Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10

Female, age 62

Sample 4
TPM: 104.7

Cell types%

Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20

Male, age 78

Sample 5
TPM: 117.8

Cell types%

Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20

Male, age 53

Sample 6
TPM: 70.8

Cell types%

Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15

Male, age 77

Sample 7
TPM: 115

Cell types%

Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20

Female, age 72

Sample 8
TPM: 70.6

Cell types%

Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40

Male, age 70

Sample 9
TPM: 68.8

Cell types%

Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25

Female, age 23

Sample 10
TPM: 65.8

Cell types%

Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM	23.6

GTEx sample id

Sample description

RPKM

Liver
RPKM: 23.6

Samples: 119

Max RPKM: 191.2
Min RPKM: 7.3
Std RPKM: 21.5
Median RPKM: 17.5

GTEX-UTHO-2426-SM-4JBHD

60-69 years, male

191.2

GTEX-ZAB4-0826-SM-5LU9D

40-49 years, male

86.5

GTEX-12WSI-0226-SM-5GCNA

50-59 years, male

77.8

GTEX-ZYY3-0626-SM-5NQ6W

60-69 years, female

74.8

GTEX-YB5E-0326-SM-5IFHU

40-49 years, male

67.7

GTEX-147F4-1426-SM-5LUA8

50-59 years, male

57.7

GTEX-Q734-0326-SM-48U15

40-49 years, female

56.3

GTEX-1497J-0726-SM-5Q5D1

60-69 years, male

54.7

GTEX-ZTPG-1426-SM-51MT3

20-29 years, female

52.1

GTEX-WYVS-1926-SM-4PQZ2

40-49 years, female

51.2

Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million	168.8

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 168.8

FF:10018-101C9

64,69,70 years, mixed

168.8