Tissue expression of VIM - Staining in stomach

STOMACH - Expression summary

Protein expression

RNA expression

HPA:	267.2	TPM
GTEx:	143.9	RPKM

STOMACH 1 - Annotated protein expression

Annotated protein
expression

Glandular cells:

Not detected

Antibody staining	Antibody HPA001762	Antibody CAB000080	Antibody CAB058687
Glandular cells	Not detected	Not detected	Not detected

STOMACH 2 - Annotated protein expression

Annotated protein
expression

Glandular cells:

Not detected

Antibody staining	Antibody HPA001762	Antibody CAB000080	Antibody CAB058687
Glandular cells	Not detected	Not detected	Not detected

STOMACH - HPA RNA-seq

Average TPM	267.2

Female, age 33

Sample 1
TPM: 227.1

Cell types%

Glandular cells: 60
Smooth muscle cells: 5
Other cell types: 35

Male, age 82

Sample 2
TPM: 260.2

Cell types%

Glandular cells: 65
Smooth muscle cells: 5
Other cell types: 30

Male, age 71

Sample 3
TPM: 397.7

Cell types%

Glandular cells: 50
Smooth muscle cells: 5
Other cell types: 45

Female, age 66

Sample 4
TPM: 184

Cell types%

Glandular cells: 50
Smooth muscle cells: 10
Other cell types: 40

STOMACH - GTEx RNA-seq

Average RPKM	143.9

GTEx sample id

Sample description

RPKM

Stomach
RPKM: 143.9

Samples: 193

Max RPKM: 724.7
Min RPKM: 25.6
Std RPKM: 131.1
Median RPKM: 92.5

GTEX-UPK5-2126-SM-4JBJK

40-49 years, male

724.7

GTEX-ZE7O-3026-SM-51MS4

50-59 years, female

701.8

GTEX-13QJ3-2726-SM-5SI6L

50-59 years, male

683.5

GTEX-UJHI-1026-SM-4IHJP

50-59 years, female

621.4

GTEX-ZYVF-2726-SM-5GID4

50-59 years, female

508.0

GTEX-13OVI-2426-SM-5KM4J

60-69 years, female

498.6

GTEX-ZPIC-2026-SM-57WG3

40-49 years, female

497.9

GTEX-11EI6-2426-SM-5PNVS

60-69 years, male

479.2

GTEX-12C56-0526-SM-5FQST

20-29 years, male

456.7

GTEX-1211K-1426-SM-5FQTF

60-69 years, female

409.6

Show all

STOMACH - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue